Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   SA286_RS11535 Genome accession   NZ_CP137888
Coordinates   2254582..2255385 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain ECC22     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2249582..2260385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA286_RS11520 (SA286_11520) - 2251798..2252034 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  SA286_RS11525 (SA286_11525) - 2252068..2252805 (-) 738 WP_249855936.1 glycerophosphodiester phosphodiesterase -
  SA286_RS11530 (SA286_11530) - 2253032..2254132 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  SA286_RS11535 (SA286_11535) spo0A 2254582..2255385 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  SA286_RS11540 (SA286_11540) spoIVB 2255669..2256946 (-) 1278 WP_008342225.1 SpoIVB peptidase -
  SA286_RS11545 (SA286_11545) recN 2257145..2258878 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  SA286_RS11550 (SA286_11550) ahrC 2258913..2259362 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  SA286_RS11555 (SA286_11555) - 2259524..2260378 (-) 855 WP_324657381.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=901038 SA286_RS11535 WP_008342226.1 2254582..2255385(-) (spo0A) [Bacillus altitudinis strain ECC22]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=901038 SA286_RS11535 WP_008342226.1 2254582..2255385(-) (spo0A) [Bacillus altitudinis strain ECC22]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGTGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCAATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884