Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   SA286_RS06780 Genome accession   NZ_CP137888
Coordinates   1350768..1351229 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus altitudinis strain ECC22     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345768..1356229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA286_RS06755 (SA286_06755) - 1346171..1347055 (+) 885 WP_056704830.1 cation diffusion facilitator family transporter -
  SA286_RS06760 (SA286_06760) - 1347119..1347271 (-) 153 WP_017367142.1 hypothetical protein -
  SA286_RS06765 (SA286_06765) - 1347572..1348111 (+) 540 WP_039169112.1 RDD family protein -
  SA286_RS06770 (SA286_06770) - 1348237..1349547 (+) 1311 WP_324657900.1 MFS transporter -
  SA286_RS06775 (SA286_06775) - 1349621..1350529 (+) 909 WP_024719666.1 chemotaxis protein -
  SA286_RS06780 (SA286_06780) kre 1350768..1351229 (-) 462 WP_008356877.1 YkyB family protein Regulator
  SA286_RS06785 (SA286_06785) - 1351707..1351922 (-) 216 WP_008348016.1 hypothetical protein -
  SA286_RS06790 (SA286_06790) - 1352090..1352266 (+) 177 WP_162835673.1 hypothetical protein -
  SA286_RS06795 (SA286_06795) - 1352492..1353769 (-) 1278 WP_008348012.1 MFS transporter -
  SA286_RS06800 (SA286_06800) - 1353843..1354340 (-) 498 WP_024719572.1 L,D-transpeptidase family protein -
  SA286_RS06805 (SA286_06805) - 1354497..1355354 (-) 858 WP_041507379.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=901029 SA286_RS06780 WP_008356877.1 1350768..1351229(-) (kre) [Bacillus altitudinis strain ECC22]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=901029 SA286_RS06780 WP_008356877.1 1350768..1351229(-) (kre) [Bacillus altitudinis strain ECC22]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCTGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765