Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SA286_RS05170 Genome accession   NZ_CP137888
Coordinates   1036934..1037884 (+) Length   316 a.a.
NCBI ID   WP_100325415.1    Uniprot ID   -
Organism   Bacillus altitudinis strain ECC22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1031934..1042884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA286_RS05150 (SA286_05150) - 1033169..1033651 (+) 483 WP_007499155.1 hypothetical protein -
  SA286_RS05155 (SA286_05155) - 1033682..1035121 (-) 1440 WP_173407929.1 PLP-dependent aminotransferase family protein -
  SA286_RS05160 (SA286_05160) - 1035265..1036434 (+) 1170 WP_081114756.1 MFS transporter -
  SA286_RS05165 (SA286_05165) - 1036496..1036774 (+) 279 WP_286108809.1 barstar family protein -
  SA286_RS05170 (SA286_05170) ceuB 1036934..1037884 (+) 951 WP_100325415.1 ABC transporter permease Machinery gene
  SA286_RS05175 (SA286_05175) - 1037877..1038827 (+) 951 WP_039963452.1 iron chelate uptake ABC transporter family permease subunit -
  SA286_RS05180 (SA286_05180) - 1038818..1039576 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  SA286_RS05185 (SA286_05185) - 1039599..1040543 (+) 945 WP_251185321.1 siderophore ABC transporter substrate-binding protein -
  SA286_RS05190 (SA286_05190) - 1040683..1041639 (+) 957 WP_007499147.1 LCP family protein -
  SA286_RS05195 (SA286_05195) - 1041674..1042108 (-) 435 WP_045034715.1 hypothetical protein -
  SA286_RS05200 (SA286_05200) - 1042194..1042556 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34915.26 Da        Isoelectric Point: 9.7475

>NTDB_id=901017 SA286_RS05170 WP_100325415.1 1036934..1037884(+) (ceuB) [Bacillus altitudinis strain ECC22]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMGIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=901017 SA286_RS05170 WP_100325415.1 1036934..1037884(+) (ceuB) [Bacillus altitudinis strain ECC22]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGGGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494