Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ABGT19_RS16945 Genome accession   NZ_CP156993
Coordinates   3156134..3156859 (-) Length   241 a.a.
NCBI ID   WP_014480811.1    Uniprot ID   -
Organism   Bacillus subtilis strain AR03-27     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3151134..3161859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT19_RS16930 (ABGT19_16930) - 3151514..3153310 (-) 1797 WP_014480806.1 M3 family oligoendopeptidase -
  ABGT19_RS16935 (ABGT19_16935) - 3154558..3154686 (-) 129 WP_014480809.1 hypothetical protein -
  ABGT19_RS16940 (ABGT19_16940) - 3154941..3156137 (-) 1197 WP_029318434.1 ABC transporter permease -
  ABGT19_RS16945 (ABGT19_16945) pptA 3156134..3156859 (-) 726 WP_014480811.1 ABC transporter ATP-binding protein Regulator
  ABGT19_RS16950 (ABGT19_16950) - 3156917..3158023 (-) 1107 WP_014480812.1 methyltransferase -
  ABGT19_RS16955 (ABGT19_16955) - 3158053..3159294 (-) 1242 WP_014480813.1 MFS transporter -
  ABGT19_RS16960 (ABGT19_16960) - 3159284..3159808 (-) 525 WP_014480814.1 GNAT family N-acetyltransferase -
  ABGT19_RS16965 (ABGT19_16965) - 3159808..3161142 (-) 1335 WP_014480815.1 glutathionylspermidine synthase family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 27577.45 Da        Isoelectric Point: 7.9039

>NTDB_id=900962 ABGT19_RS16945 WP_014480811.1 3156134..3156859(-) (pptA) [Bacillus subtilis strain AR03-27]
MLRVEQVTGGYKRNKMANHNISFQIDKGEIVGLVGLNGAGKSTIIKHILGILKPTEGRVTLDGVSLRDDPSYFRPRISYI
PEVPQLYQELTLWEHLEFTASAYKMKREKFELKAAELLKKFRMEKKINDYPQTFSKGMQQKVMILCAFLVEAVFFIIDEP
FVGLDPLAIDTLIDLMVEMKQRGMGILVSTHILTMAEKYCDRVVFLHEGKVKVQGTIQEIQDQMKMNDVSLEEMFIGVVK
N

Nucleotide


Download         Length: 726 bp        

>NTDB_id=900962 ABGT19_RS16945 WP_014480811.1 3156134..3156859(-) (pptA) [Bacillus subtilis strain AR03-27]
ATGTTGCGCGTAGAACAGGTTACAGGAGGTTATAAGCGTAATAAGATGGCAAACCACAATATTTCTTTTCAGATTGATAA
AGGGGAAATAGTTGGTTTAGTTGGGCTAAATGGTGCGGGGAAAAGCACGATCATTAAGCACATCTTAGGTATCTTAAAAC
CCACTGAAGGCCGTGTTACACTTGATGGTGTGTCATTAAGAGATGATCCCTCCTATTTTAGGCCGCGTATTTCCTATATC
CCTGAAGTTCCTCAATTATATCAAGAATTAACTCTTTGGGAACATTTGGAATTCACTGCATCAGCTTATAAAATGAAAAG
AGAAAAATTCGAATTAAAAGCGGCCGAACTGTTAAAAAAATTTAGAATGGAAAAAAAAATAAATGATTACCCGCAGACTT
TTTCGAAGGGGATGCAACAAAAGGTTATGATTCTTTGTGCCTTCTTGGTTGAAGCAGTTTTCTTTATTATTGATGAACCC
TTTGTTGGGCTAGATCCTTTAGCAATTGATACATTAATTGATTTAATGGTTGAAATGAAACAGAGGGGAATGGGAATCCT
TGTTTCTACTCATATTTTAACTATGGCTGAAAAATATTGTGACCGTGTTGTTTTCTTACATGAGGGAAAGGTTAAGGTGC
AAGGAACCATTCAGGAAATTCAAGATCAGATGAAAATGAATGATGTTTCATTAGAAGAAATGTTTATTGGGGTTGTGAAA
AATTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

48.548

100

0.485
  pptA Streptococcus thermophilus LMD-9

48.548

100

0.485