Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | HK937_RS05695 | Genome accession | NZ_CP137883 |
| Coordinates | 1099938..1100240 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain P4549 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1094938..1105240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HK937_RS05670 (HK937_0005670) | rpsR | 1095301..1095561 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| HK937_RS05675 (HK937_0005675) | lon | 1095621..1097996 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| HK937_RS05680 (HK937_0005680) | - | 1098013..1098660 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| HK937_RS05685 (HK937_0005685) | fliW | 1098821..1099210 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| HK937_RS05690 (HK937_0005690) | proC | 1099210..1099941 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| HK937_RS05695 (HK937_0005695) | ctsT | 1099938..1100240 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| HK937_RS05700 (HK937_0005700) | - | 1100237..1100899 (+) | 663 | WP_044257982.1 | hypothetical protein | - |
| HK937_RS05705 (HK937_0005705) | - | 1100896..1101348 (+) | 453 | WP_224385675.1 | hypothetical protein | - |
| HK937_RS05710 (HK937_0005710) | hemD | 1101345..1101974 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| HK937_RS05715 (HK937_0005715) | thiE | 1101952..1102584 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| HK937_RS05720 (HK937_0005720) | thiD | 1102574..1103386 (-) | 813 | WP_224385676.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| HK937_RS05725 (HK937_0005725) | - | 1103383..1104069 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| HK937_RS05730 (HK937_0005730) | - | 1104066..1104827 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=900957 HK937_RS05695 WP_002853046.1 1099938..1100240(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain P4549]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=900957 HK937_RS05695 WP_002853046.1 1099938..1100240(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain P4549]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |