Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R9X41_RS02345 Genome accession   NZ_CP137854
Coordinates   509693..510091 (+) Length   132 a.a.
NCBI ID   WP_318633298.1    Uniprot ID   -
Organism   Xylophilus sp. GOD-11R     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 504693..515091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9X41_RS02325 (R9X41_02325) - 504857..506974 (+) 2118 WP_318633295.1 TonB-dependent receptor -
  R9X41_RS02330 (R9X41_02330) hemL 506988..508274 (-) 1287 WP_318633296.1 glutamate-1-semialdehyde 2,1-aminomutase -
  R9X41_RS02335 (R9X41_02335) thiD 508316..509266 (-) 951 WP_318633297.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  R9X41_RS02340 (R9X41_02340) - 509440..509592 (+) 153 WP_268236194.1 rubredoxin -
  R9X41_RS02345 (R9X41_02345) pilG 509693..510091 (+) 399 WP_318633298.1 response regulator Regulator
  R9X41_RS02350 (R9X41_02350) - 510091..510456 (+) 366 WP_318633299.1 response regulator -
  R9X41_RS02355 (R9X41_02355) - 510468..510998 (+) 531 WP_318633300.1 chemotaxis protein CheW -
  R9X41_RS02360 (R9X41_02360) - 511312..513513 (+) 2202 WP_412556692.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14614.90 Da        Isoelectric Point: 7.0825

>NTDB_id=900908 R9X41_RS02345 WP_318633298.1 509693..510091(+) (pilG) [Xylophilus sp. GOD-11R]
MSTSPKGCRVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALAKVNDFEPELIFCDILMPRLDGYQTCAIVKRNPRFA
ATPVVMLSSKDGVFDRARGRMVGCQDYLTKPFTKDQLLHVVQQLAPSQTGVV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=900908 R9X41_RS02345 WP_318633298.1 509693..510091(+) (pilG) [Xylophilus sp. GOD-11R]
GTGAGCACAAGCCCGAAAGGCTGCAGGGTTCTGGTGGTGGACGACAGCAACACCATCCGGCGCAGCGCCGAGATCTTTCT
CAAGCAGGGCGGCCACGAGGTGCTGCTGGCCGAGGACGGCTTCGACGCGCTCGCCAAGGTCAACGACTTCGAGCCCGAGC
TGATCTTCTGCGACATCCTCATGCCCCGGCTCGACGGTTACCAGACCTGTGCCATCGTCAAGCGCAACCCGCGCTTCGCC
GCCACGCCGGTCGTCATGCTCTCGTCCAAGGACGGCGTGTTCGACCGGGCGCGCGGCCGCATGGTCGGCTGCCAGGACTA
CCTGACCAAACCCTTCACCAAGGACCAGCTGCTCCATGTGGTGCAGCAGCTGGCTCCATCGCAGACAGGAGTCGTCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

51.969

96.212

0.5