Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ABGT19_RS05630 Genome accession   NZ_CP156993
Coordinates   1078666..1079409 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain AR03-27     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1073666..1084409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT19_RS05595 (ABGT19_05595) yhaI 1073995..1074336 (+) 342 WP_033881416.1 YhaI family protein -
  ABGT19_RS05600 (ABGT19_05600) scoC 1074333..1074944 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ABGT19_RS05605 (ABGT19_05605) yhaH 1075122..1075478 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  ABGT19_RS05610 (ABGT19_05610) - 1075608..1075799 (+) 192 WP_003233238.1 hypothetical protein -
  ABGT19_RS05615 (ABGT19_05615) trpP 1075872..1076390 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  ABGT19_RS05620 (ABGT19_05620) serC 1076515..1077594 (-) 1080 WP_014479338.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ABGT19_RS05625 (ABGT19_05625) hinT 1077741..1078178 (-) 438 WP_003233231.1 HIT family protein -
  ABGT19_RS05630 (ABGT19_05630) pptA 1078666..1079409 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ABGT19_RS05635 (ABGT19_05635) ecsB 1079402..1080628 (+) 1227 WP_014479339.1 ABC transporter permease EcsB -
  ABGT19_RS05640 (ABGT19_05640) ecsC 1080648..1081358 (+) 711 WP_014479340.1 EcsC family protein -
  ABGT19_RS05645 (ABGT19_05645) sndC 1081375..1082565 (-) 1191 WP_014479341.1 N-acetyl amino acid acetylase SndC -
  ABGT19_RS05650 (ABGT19_05650) - 1082638..1084029 (-) 1392 WP_014479342.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=900873 ABGT19_RS05630 WP_003233230.1 1078666..1079409(+) (pptA) [Bacillus subtilis strain AR03-27]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=900873 ABGT19_RS05630 WP_003233230.1 1078666..1079409(+) (pptA) [Bacillus subtilis strain AR03-27]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGTGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547