Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | R2B76_RS23890 | Genome accession | NZ_CP137800 |
| Coordinates | 4561490..4562542 (-) | Length | 350 a.a. |
| NCBI ID | WP_013085018.1 | Uniprot ID | D5DMH8 |
| Organism | Priestia megaterium strain Y18-01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4556490..4567542
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2B76_RS23850 (R2B76_23860) | - | 4557506..4558330 (+) | 825 | WP_013085011.1 | YqhG family protein | - |
| R2B76_RS23855 (R2B76_23865) | - | 4558354..4558539 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| R2B76_RS23860 (R2B76_23870) | comGG | 4558583..4558957 (-) | 375 | WP_318615992.1 | competence type IV pilus minor pilin ComGG | - |
| R2B76_RS23865 (R2B76_23875) | comGF | 4558947..4559384 (-) | 438 | WP_318615994.1 | competence type IV pilus minor pilin ComGF | - |
| R2B76_RS23870 (R2B76_23880) | - | 4559381..4559719 (-) | 339 | WP_028410645.1 | type II secretion system protein | - |
| R2B76_RS23875 (R2B76_23885) | comGD | 4559703..4560185 (-) | 483 | WP_223260330.1 | competence type IV pilus minor pilin ComGD | - |
| R2B76_RS23880 (R2B76_23890) | comGC | 4560127..4560438 (-) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| R2B76_RS23885 (R2B76_23895) | comGB | 4560453..4561499 (-) | 1047 | WP_251530572.1 | competence type IV pilus assembly protein ComGB | - |
| R2B76_RS23890 (R2B76_23900) | comGA | 4561490..4562542 (-) | 1053 | WP_013085018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| R2B76_RS23895 (R2B76_23905) | - | 4562811..4563194 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| R2B76_RS23900 (R2B76_23910) | - | 4563457..4563693 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| R2B76_RS23905 (R2B76_23915) | - | 4563731..4564363 (-) | 633 | WP_075419613.1 | MBL fold metallo-hydrolase | - |
| R2B76_RS23910 (R2B76_23920) | - | 4564572..4564748 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| R2B76_RS23915 (R2B76_23925) | - | 4564784..4565686 (-) | 903 | WP_318616005.1 | M14 family metallocarboxypeptidase | - |
| R2B76_RS23920 (R2B76_23930) | - | 4565798..4566766 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| R2B76_RS23925 (R2B76_23935) | - | 4566769..4566975 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39671.03 Da Isoelectric Point: 9.1859
>NTDB_id=900732 R2B76_RS23890 WP_013085018.1 4561490..4562542(-) (comGA) [Priestia megaterium strain Y18-01]
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=900732 R2B76_RS23890 WP_013085018.1 4561490..4562542(-) (comGA) [Priestia megaterium strain Y18-01]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTAATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGTGAAACTGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGAATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTAATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGTGAAACTGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGAATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.857 |
100 |
0.589 |