Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   R2B76_RS03515 Genome accession   NZ_CP137800
Coordinates   665465..665659 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain Y18-01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 660465..670659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2B76_RS03490 (R2B76_03490) galT 660530..662053 (+) 1524 WP_251441807.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  R2B76_RS03495 (R2B76_03495) - 662096..662980 (-) 885 WP_075421187.1 NAD(P)-dependent oxidoreductase -
  R2B76_RS03500 (R2B76_03500) - 663183..663371 (-) 189 WP_013055400.1 YjzD family protein -
  R2B76_RS03505 (R2B76_03505) - 663581..664321 (+) 741 WP_075421188.1 alpha/beta hydrolase -
  R2B76_RS03510 (R2B76_03510) - 664503..665387 (+) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  R2B76_RS03515 (R2B76_03515) comZ 665465..665659 (+) 195 WP_013081746.1 ComZ family protein Regulator
  R2B76_RS03520 (R2B76_03520) - 665688..665888 (-) 201 WP_016763038.1 hypothetical protein -
  R2B76_RS03525 (R2B76_03525) - 666145..667083 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  R2B76_RS03530 (R2B76_03530) fabF 667123..668364 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  R2B76_RS03535 (R2B76_03535) - 668471..669244 (+) 774 WP_075421189.1 DUF2268 domain-containing protein -
  R2B76_RS03540 (R2B76_03540) - 669460..670482 (+) 1023 WP_318617277.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=900702 R2B76_RS03515 WP_013081746.1 665465..665659(+) (comZ) [Priestia megaterium strain Y18-01]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=900702 R2B76_RS03515 WP_013081746.1 665465..665659(+) (comZ) [Priestia megaterium strain Y18-01]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563