Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R5H22_RS00635 Genome accession   NZ_CP137764
Coordinates   119274..119681 (+) Length   135 a.a.
NCBI ID   WP_012699006.1    Uniprot ID   M9YDI7
Organism   Azotobacter sp. NL3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 114274..124681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5H22_RS00610 (R5H22_00610) pyrR 115471..115974 (-) 504 WP_012699001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  R5H22_RS00615 (R5H22_00615) ruvX 116018..116446 (-) 429 WP_012699002.1 Holliday junction resolvase RuvX -
  R5H22_RS00620 (R5H22_00620) - 116443..117015 (-) 573 WP_041806863.1 YqgE/AlgH family protein -
  R5H22_RS00625 (R5H22_00625) - 117103..117996 (-) 894 WP_012699004.1 energy transducer TonB -
  R5H22_RS00630 (R5H22_00630) gshB 118090..119046 (-) 957 WP_012699005.1 glutathione synthase -
  R5H22_RS00635 (R5H22_00635) pilG 119274..119681 (+) 408 WP_012699006.1 twitching motility response regulator PilG Regulator
  R5H22_RS00640 (R5H22_00640) - 120034..120753 (-) 720 WP_012699007.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -
  R5H22_RS00645 (R5H22_00645) - 120896..121435 (+) 540 WP_012699008.1 DUF3087 domain-containing protein -
  R5H22_RS00650 (R5H22_00650) - 121508..122914 (-) 1407 WP_012699009.1 adenosylmethionine--8-amino-7-oxononanoate transaminase -
  R5H22_RS00655 (R5H22_00655) - 123074..124588 (+) 1515 WP_231876177.1 flavin monoamine oxidase family protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14855.27 Da        Isoelectric Point: 7.3231

>NTDB_id=900593 R5H22_RS00635 WP_012699006.1 119274..119681(+) (pilG) [Azotobacter sp. NL3]
MEHHSDGLKVMVIDDSKMIRRTAETLLKRVGCEVITAVDGFDALAKIADGHPRIIFVDIAMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSEQYLTKPFGKEELLGAIRAHVPDFVPLEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=900593 R5H22_RS00635 WP_012699006.1 119274..119681(+) (pilG) [Azotobacter sp. NL3]
ATGGAACATCATTCCGACGGTTTGAAGGTCATGGTGATCGACGACTCAAAGATGATTCGTCGCACTGCGGAAACCCTGCT
GAAGAGGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGACGGTCATCCGCGGA
TCATCTTCGTCGACATCGCGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGACGTATCGTCGGTTCCGAGCAGTA
TCTGACCAAGCCCTTCGGCAAGGAAGAACTGCTGGGCGCGATCAGGGCCCACGTGCCCGATTTCGTCCCGCTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M9YDI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

92.593

0.689