Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RGF10_RS19555 Genome accession   NZ_CP137761
Coordinates   3824342..3825010 (-) Length   222 a.a.
NCBI ID   WP_318509599.1    Uniprot ID   -
Organism   Bacillus sp. T3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3819342..3830010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGF10_RS19545 pepF 3820896..3822720 (-) 1825 Protein_3852 oligoendopeptidase F -
  RGF10_RS19550 - 3822835..3824046 (-) 1212 WP_318505081.1 competence protein CoiA -
  RGF10_RS19555 mecA 3824342..3825010 (-) 669 WP_318509599.1 adaptor protein MecA Regulator
  RGF10_RS19560 spxA 3825361..3825756 (-) 396 WP_318505082.1 transcriptional regulator SpxA -
  RGF10_RS19565 - 3826383..3826568 (+) 186 WP_318505083.1 hypothetical protein -
  RGF10_RS19570 - 3826635..3827570 (-) 936 WP_318505084.1 ABC transporter ATP-binding protein -
  RGF10_RS19575 - 3827575..3828639 (-) 1065 WP_318505085.1 ABC transporter ATP-binding protein -
  RGF10_RS19580 - 3828650..3829564 (-) 915 WP_318505086.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 26661.68 Da        Isoelectric Point: 4.0397

>NTDB_id=900580 RGF10_RS19555 WP_318509599.1 3824342..3825010(-) (mecA) [Bacillus sp. T3]
MEIERINEHTVKFYISYGDIEERGFDREEIWYNRERSEELFWEMMDEVHQEEEFSVEGPLWIQVQALEKGLEVLVTKAQL
SKDGQKFELPVPDEKTKDFPVDERIEEMLDHHFNPRNEQDQIELVEDNLEFLLAFADFEDCIALSKRPGLDSLLTKLYSF
ENKYYLFVEFPEEEFEEEEIDDFLSILLEYSHESALTIHRVEEYGNLIIGENVFQTLRKHFT

Nucleotide


Download         Length: 669 bp        

>NTDB_id=900580 RGF10_RS19555 WP_318509599.1 3824342..3825010(-) (mecA) [Bacillus sp. T3]
ATGGAAATTGAACGTATAAACGAGCATACTGTTAAATTTTATATTTCTTATGGTGATATAGAGGAAAGAGGCTTCGATCG
TGAAGAAATTTGGTATAATCGTGAGCGAAGTGAAGAACTTTTCTGGGAAATGATGGATGAGGTTCATCAGGAAGAAGAAT
TTAGTGTCGAAGGTCCGCTGTGGATTCAGGTGCAAGCATTAGAAAAAGGGCTTGAGGTTTTAGTGACAAAGGCTCAGCTT
TCTAAGGATGGACAAAAATTTGAATTGCCTGTTCCTGATGAGAAAACCAAGGACTTCCCTGTTGATGAACGCATCGAGGA
AATGCTTGATCACCATTTTAATCCACGTAACGAACAAGACCAAATTGAACTGGTGGAAGATAATCTAGAGTTTTTATTAG
CTTTCGCTGATTTCGAGGATTGCATAGCGCTATCCAAACGACCTGGGTTAGATAGTTTACTAACAAAGCTTTATTCTTTT
GAAAATAAATATTACTTGTTTGTTGAATTTCCAGAAGAAGAGTTTGAAGAAGAGGAAATTGATGATTTCCTAAGTATCCT
TCTAGAATATTCACACGAGTCGGCCTTAACGATTCATCGTGTTGAAGAATACGGTAATCTTATTATTGGAGAGAATGTAT
TCCAAACATTACGAAAGCACTTTACCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

63.063

100

0.631