Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   ABG803_RS10175 Genome accession   NZ_CP156930
Coordinates   2177038..2177394 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2024CK-00356     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2172038..2182394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG803_RS10150 (ABG803_10150) fabF 2172250..2173494 (+) 1245 WP_033946417.1 beta-ketoacyl-ACP synthase II -
  ABG803_RS10155 (ABG803_10155) pabC 2173494..2174309 (+) 816 WP_003113994.1 aminodeoxychorismate lyase -
  ABG803_RS10160 (ABG803_10160) mltG 2174315..2175364 (+) 1050 WP_033946419.1 endolytic transglycosylase MltG -
  ABG803_RS10165 (ABG803_10165) tmk 2175393..2176025 (+) 633 WP_003091125.1 dTMP kinase -
  ABG803_RS10170 (ABG803_10170) - 2176018..2177004 (+) 987 WP_347915098.1 DNA polymerase III subunit delta' -
  ABG803_RS10175 (ABG803_10175) pilZ 2177038..2177394 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  ABG803_RS10180 (ABG803_10180) - 2177409..2178185 (+) 777 WP_347915100.1 TatD family hydrolase -
  ABG803_RS10185 (ABG803_10185) - 2178412..2179545 (-) 1134 WP_003104119.1 aminotransferase class V-fold PLP-dependent enzyme -
  ABG803_RS10190 (ABG803_10190) - 2179631..2180269 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  ABG803_RS10195 (ABG803_10195) - 2180419..2181315 (+) 897 WP_003091113.1 radical SAM protein -
  ABG803_RS10200 (ABG803_10200) - 2181380..2182012 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=900273 ABG803_RS10175 WP_003091119.1 2177038..2177394(+) (pilZ) [Pseudomonas aeruginosa strain 2024CK-00356]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=900273 ABG803_RS10175 WP_003091119.1 2177038..2177394(+) (pilZ) [Pseudomonas aeruginosa strain 2024CK-00356]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449