Detailed information NTG0090022

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK15_RS21370
• Genome accession: NZ_AP027759
• Coordinates: 4408020..4409045 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017-02-1CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4403020..4414045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK15_RS21350 (VEE73_40960)	metJ	4404081..4404398 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK15_RS21355 (VEE73_40970)	yiiX	4404582..4405190 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK15_RS21360 (VEE73_40980)	rpmE	4405251..4405463 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK15_RS21365 (VEE73_40990)	priA	4405666..4407864 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABK15_RS21370 (VEE73_41000)	cytR	4408020..4409045 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK15_RS21375 (VEE73_41010)	ftsN	4409137..4410096 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK15_RS21380 (VEE73_41020)	hslV	4410189..4410719 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK15_RS21385 (VEE73_41030)	hslU	4410729..4412060 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK15_RS21390 (VEE73_41040)	menA	4412127..4413053 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK15_RS21395 (VEE73_41050)	rraA	4413146..4413631 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK15_RS21400 (VEE73_41060)	zapB	4413716..4413961 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=90022 AABK15_RS21370 WP_000644904.1 4408020..4409045(+) (cytR) [Escherichia coli strain 2017-02-1CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=90022 AABK15_RS21370 WP_000644904.1 4408020..4409045(+) (cytR) [Escherichia coli strain 2017-02-1CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628