Detailed information NTG0900154

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: ABEF00_RS21435
• Genome accession: NZ_CP156718
• Coordinates: 4468104..4469348 (-)
• Length: 414 a.a.
• NCBI ID: WP_193958542.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC596
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4463104..4474348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF00_RS21410	-	4464342..4464992 (-)	651	Protein_4180	MFS transporter	-
ABEF00_RS21415	-	4465094..4465450 (-)	357	Protein_4181	hypothetical protein	-
ABEF00_RS21420	-	4465508..4466205 (+)	698	WP_095033700.1	IS1-like element IS1B family transposase	-
ABEF00_RS21425	-	4466445..4467449 (+)	1005	WP_000427620.1	IS110-like element IS4321 family transposase	-
ABEF00_RS21430	-	4467727..4467864 (+)	138	Protein_4184	IS5/IS1182 family transposase	-
ABEF00_RS21435	kpsS	4468104..4469348 (-)	1245	WP_193958542.1	capsular biosynthesis protein	Regulator
ABEF00_RS21440	-	4469438..4471441 (-)	2004	WP_196607588.1	capsular polysaccharide biosynthesis protein	-
ABEF00_RS21445	rfbC	4471492..4472040 (-)	549	WP_142488107.1	dTDP-4-dehydrorhamnose 3,5-epimerase	-
ABEF00_RS21450	-	4472093..4472476 (-)	384	Protein_4188	sugar phosphate nucleotidyltransferase	-
ABEF00_RS21455	-	4472466..4473036 (-)	571	Protein_4189	sugar nucleotide-binding protein	-
ABEF00_RS21460	rfbB	4473036..4474121 (-)	1086	WP_196607589.1	dTDP-glucose 4,6-dehydratase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 48909.17 Da
• Isoelectric Point: 9.9602

>NTDB_id=900154 ABEF00_RS21435 WP_193958542.1 4468104..4469348(-) (kpsS) [Escherichia coli strain EC596]
MEEQAIRHLLNGRRYLLLQGPMGPCFSRLASWLQSSKREVKQVCFNAGDSWYAAKETALHYTGSVKNFAFWLRELHKTYP
FDTIVCFGDCRPMHIEAKKWARSKSIDFLAFEEGYFRPFYITLEKGGVNAFSSMPIDAKYYREQPLPELKTPTPWKPSSF
NRAAHAMLYYAAGWFGRHRYRGYRHHKSFSPWYEMRCWFRAGRRKLWYRWQQRHMLSHITEKLDNQYYLAILQVYNDSQI
IHHSPYKDVRDYIETVIRSFARHASKERYLVFKHHPMDRGHRFYGILINKLTEKYDISGRVLYVHDLSLPALLTHTRGVI
TVNSTAGLSALIHNKPLKVMGKALYDIEGLTWQGPLNQFWQADFAPDAKLFQRFRTHLLYQTQINAVFYGKSDWLNIPTE
IPLTTPLADSELER

Nucleotide

• Length: 1245 bp

>NTDB_id=900154 ABEF00_RS21435 WP_193958542.1 4468104..4469348(-) (kpsS) [Escherichia coli strain EC596]
ATGGAAGAGCAAGCTATCCGCCATCTGCTGAATGGCCGCCGATATCTTTTATTACAAGGACCGATGGGCCCCTGCTTTTC
ACGTCTGGCAAGCTGGTTGCAGAGCAGCAAGCGTGAAGTGAAGCAGGTCTGCTTTAATGCCGGGGACTCATGGTACGCCG
CGAAAGAGACCGCGCTGCACTACACCGGCTCAGTAAAAAATTTTGCCTTCTGGCTGCGCGAGTTACATAAAACCTACCCC
TTCGACACCATCGTCTGTTTTGGTGACTGTCGCCCGATGCATATCGAAGCGAAGAAGTGGGCGCGCAGCAAATCCATCGA
TTTTCTGGCGTTTGAAGAGGGCTATTTCCGTCCCTTCTACATCACCCTGGAAAAAGGGGGCGTGAATGCCTTCTCCTCGA
TGCCCATTGATGCGAAGTATTATCGCGAGCAGCCGCTGCCGGAGCTGAAAACCCCAACGCCGTGGAAACCGAGTTCCTTT
AACCGTGCCGCCCATGCCATGCTCTACTATGCGGCGGGCTGGTTTGGCCGCCATCGCTACCGGGGCTACCGCCACCACAA
GTCGTTCTCCCCGTGGTATGAGATGCGCTGCTGGTTTCGCGCCGGTCGCCGTAAGCTGTGGTATCGCTGGCAGCAGCGCC
ACATGCTGAGCCATATCACTGAAAAACTGGATAATCAGTACTACCTGGCAATTTTGCAGGTCTACAACGACAGCCAGATT
ATTCATCACAGCCCGTATAAAGACGTGCGTGACTATATCGAAACCGTGATCCGCTCCTTTGCCCGCCATGCGTCGAAAGA
GCGCTATCTGGTGTTCAAGCATCACCCGATGGATCGTGGTCACCGTTTTTACGGCATCCTGATTAACAAGCTGACCGAAA
AGTATGACATCAGCGGCCGGGTGCTCTATGTCCACGATCTCTCCCTGCCCGCCCTGCTGACCCACACCCGGGGCGTCATC
ACCGTGAACAGCACCGCCGGCCTGTCGGCGCTGATCCATAACAAGCCGCTCAAGGTGATGGGCAAAGCGCTGTACGACAT
CGAAGGGTTAACCTGGCAGGGGCCGCTGAACCAGTTCTGGCAGGCGGATTTTGCTCCCGATGCAAAACTGTTCCAGCGTT
TTCGTACCCACCTGCTCTATCAAACGCAGATCAACGCCGTCTTTTACGGCAAGTCCGACTGGCTGAACATCCCGACAGAA
ATTCCCCTGACGACACCGCTTGCCGATTCCGAGCTCGAACGCTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.052	93.478	0.374