Detailed information NTG0899914

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: R6I10_RS20210
• Genome accession: NZ_CP137695
• Coordinates: 3844828..3845973 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate FELIX_MS382
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3839828..3850973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6I10_RS20185 (R6I10_20185)	albF	3839844..3841124 (+)	1281	WP_003242974.1	M16 family metallopeptidase	-
R6I10_RS20190 (R6I10_20190)	albG	3841121..3841822 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
R6I10_RS20195 (R6I10_20195)	ywhL	3841828..3843204 (-)	1377	WP_003244415.1	YncE family protein	-
R6I10_RS20200 (R6I10_20200)	ywhK	3843243..3844598 (-)	1356	WP_003227552.1	YncE family protein	-
R6I10_RS20205 (R6I10_20205)	-	3844595..3844825 (-)	231	WP_009968328.1	hypothetical protein	-
R6I10_RS20210 (R6I10_20210)	rapF	3844828..3845973 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
R6I10_RS20215 (R6I10_20215)	phrF	3845957..3846076 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
R6I10_RS20220 (R6I10_20220)	ywhH	3846175..3846648 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
R6I10_RS20225 (R6I10_20225)	speB	3846680..3847552 (-)	873	WP_003227545.1	agmatinase	-
R6I10_RS20230 (R6I10_20230)	speE	3847613..3848443 (-)	831	WP_003227543.1	spermidine synthase	-
R6I10_RS20235 (R6I10_20235)	pbpG	3848645..3850720 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=899914 R6I10_RS20210 WP_003227549.1 3844828..3845973(+) (rapF) [Bacillus subtilis isolate FELIX_MS382]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=899914 R6I10_RS20210 WP_003227549.1 3844828..3845973(+) (rapF) [Bacillus subtilis isolate FELIX_MS382]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572