Detailed information NTG0899797

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABFT25_RS14215
• Genome accession: NZ_CP156662
• Coordinates: 2894015..2895040 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PKF4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2889015..2900040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT25_RS14190 (ABFT25_14190)	rraA	2889429..2889914 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABFT25_RS14195 (ABFT25_14195)	menA	2890007..2890933 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABFT25_RS14200 (ABFT25_14200)	hslU	2891000..2892331 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABFT25_RS14205 (ABFT25_14205)	hslV	2892341..2892871 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABFT25_RS14210 (ABFT25_14210)	ftsN	2892964..2893923 (-)	960	WP_000068844.1	cell division protein FtsN	-
ABFT25_RS14215 (ABFT25_14215)	cytR	2894015..2895040 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABFT25_RS14220 (ABFT25_14220)	priA	2895196..2897394 (-)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
ABFT25_RS14225 (ABFT25_14225)	rpmE	2897597..2897809 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABFT25_RS14230 (ABFT25_14230)	yiiX	2897870..2898478 (-)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
ABFT25_RS14235 (ABFT25_14235)	metJ	2898538..2898855 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=899797 ABFT25_RS14215 WP_000644904.1 2894015..2895040(-) (cytR) [Escherichia coli strain PKF4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=899797 ABFT25_RS14215 WP_000644904.1 2894015..2895040(-) (cytR) [Escherichia coli strain PKF4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628