Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   R6Y88_RS08960 Genome accession   NZ_CP137687
Coordinates   1770072..1770212 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain YT-4     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1765072..1775212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6Y88_RS08955 - 1768954..1770126 (-) 1173 Protein_1753 condensation domain-containing protein -
  R6Y88_RS08960 comS 1770072..1770212 (-) 141 WP_010886404.1 competence protein ComS Regulator
  R6Y88_RS08965 srfAB 1770304..1773348 (-) 3045 Protein_1755 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=899722 R6Y88_RS08960 WP_010886404.1 1770072..1770212(-) (comS) [Bacillus subtilis strain YT-4]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=899722 R6Y88_RS08960 WP_010886404.1 1770072..1770212(-) (comS) [Bacillus subtilis strain YT-4]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1