Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   R6Y88_RS04705 Genome accession   NZ_CP137687
Coordinates   953795..954451 (-) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain YT-4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 948795..959451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6Y88_RS04680 spxH 949005..949904 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  R6Y88_RS04685 - 950219..950386 (+) 168 WP_003244944.1 hypothetical protein -
  R6Y88_RS04690 pepF 950424..952253 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  R6Y88_RS04695 coiA 952483..953604 (-) 1122 WP_236822450.1 competence protein CoiA Machinery gene
  R6Y88_RS04700 - 953678..953792 (+) 115 Protein_936 hypothetical protein -
  R6Y88_RS04705 mecA 953795..954451 (-) 657 WP_015383354.1 adaptor protein MecA Regulator
  R6Y88_RS04710 - 954418..954558 (-) 141 WP_119122854.1 hypothetical protein -
  R6Y88_RS04715 yjbE 954728..955384 (+) 657 WP_015483086.1 TerC family protein -
  R6Y88_RS04720 spx 955427..955822 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  R6Y88_RS04725 yjbC 956003..956578 (-) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  R6Y88_RS04730 yjbB 956742..957959 (-) 1218 WP_080030656.1 MFS transporter -
  R6Y88_RS04735 oppF 958065..958982 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=899705 R6Y88_RS04705 WP_015383354.1 953795..954451(-) (mecA) [Bacillus subtilis strain YT-4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=899705 R6Y88_RS04705 WP_015383354.1 953795..954451(-) (mecA) [Bacillus subtilis strain YT-4]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCTGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995