Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   R6U77_RS07330 Genome accession   NZ_CP137624
Coordinates   1478272..1479222 (+) Length   316 a.a.
NCBI ID   WP_293929362.1    Uniprot ID   -
Organism   Lysinibacillus louembei strain Ll15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1473272..1484222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6U77_RS07310 (R6U77_07310) - 1474005..1475063 (+) 1059 WP_319837985.1 siderophore ABC transporter substrate-binding protein -
  R6U77_RS07315 (R6U77_07315) - 1475083..1476099 (+) 1017 WP_319837986.1 iron chelate uptake ABC transporter family permease subunit -
  R6U77_RS07320 (R6U77_07320) - 1476096..1477160 (+) 1065 WP_319837987.1 iron chelate uptake ABC transporter family permease subunit -
  R6U77_RS07325 (R6U77_07325) - 1477157..1477909 (+) 753 WP_319837988.1 ATP-binding cassette domain-containing protein -
  R6U77_RS07330 (R6U77_07330) ceuB 1478272..1479222 (+) 951 WP_293929362.1 ABC transporter permease Machinery gene
  R6U77_RS07335 (R6U77_07335) - 1479215..1480168 (+) 954 WP_319837989.1 iron chelate uptake ABC transporter family permease subunit -
  R6U77_RS07340 (R6U77_07340) - 1480165..1480926 (+) 762 WP_293929366.1 ABC transporter ATP-binding protein -
  R6U77_RS07345 (R6U77_07345) - 1480947..1481963 (+) 1017 WP_319837990.1 siderophore ABC transporter substrate-binding protein -
  R6U77_RS07350 (R6U77_07350) - 1481965..1482279 (+) 315 WP_319837991.1 antibiotic biosynthesis monooxygenase -
  R6U77_RS07355 (R6U77_07355) - 1482368..1483108 (+) 741 WP_319837992.1 alpha/beta hydrolase-fold protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34653.03 Da        Isoelectric Point: 10.3069

>NTDB_id=899443 R6U77_RS07330 WP_293929362.1 1478272..1479222(+) (ceuB) [Lysinibacillus louembei strain Ll15]
MKIRYLLTATIVLSILSLFIGVINIKPTDLLDFQSEETRLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATKLGVLVSMMIFTSASYLQKISLAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYKANII
QNMSAWLQGNFALIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGM
IPFLGLIIPNMVSLFKGDNLAKTLPHTALLGMSFLLICDILGRVIIYPYEIPISMTVGVIGSAIFLIMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=899443 R6U77_RS07330 WP_293929362.1 1478272..1479222(+) (ceuB) [Lysinibacillus louembei strain Ll15]
ATGAAAATAAGATATCTTTTAACTGCAACAATTGTTTTATCAATTCTGTCACTTTTTATTGGGGTTATCAATATTAAGCC
GACTGATTTGCTTGATTTCCAATCTGAGGAAACAAGGTTATTCCTTATAAGCCGTGTACCTAGACTTGTCGCTATTTTGC
TAGCAGGCGCAGGGATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTCGCAATAAATTCGTGTCACCAACAACAGCA
GGTACACTTGATGCGACAAAATTAGGCGTGCTAGTTTCGATGATGATATTTACAAGCGCAAGCTATTTACAAAAAATATC
GCTTGCTTTCATATTTGCATTAGCTGGAACGCTGCTATTTATGCAAATACTAAACCGCATTAAATTCAAAGATGCGATTT
TCATTCCATTGATCGGCTTAATGTTTGGTAATATTTTATCTTCTATTACGACATTCTTTGCGTACAAAGCAAATATTATA
CAAAATATGTCAGCTTGGCTACAGGGGAATTTTGCATTAATTATGAAAGGTCGTTATGAGCTTTTATACATAAGTGTACC
AGTGCTTATATTAGCATACATTTATGCTAACCGCTTTACTGTTGCGGGTATGGGAGAGGACTTTGCAAAAAATTTAGGTC
TATCCTATAAATTTGTTGTGAATTTAGGCTTAGTGCTAGTAGCTCTTATTTCAACAACAGTAGTGCTAACTGTCGGCATG
ATTCCATTCCTTGGATTAATTATTCCGAACATGGTCTCTTTATTTAAAGGAGATAATTTAGCGAAAACATTACCGCATAC
GGCATTGCTTGGGATGTCATTCTTATTAATATGCGATATTTTAGGACGCGTTATTATTTATCCTTATGAAATACCGATTA
GCATGACAGTCGGTGTGATTGGCAGTGCCATCTTCCTAATCATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

100

0.532