Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R6K63_RS02515 Genome accession   NZ_CP137556
Coordinates   523646..524053 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain CDC1270     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 518646..529053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6K63_RS02485 - 518694..519698 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  R6K63_RS02490 pyrR 519722..520234 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  R6K63_RS02495 ruvX 520346..520780 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  R6K63_RS02500 - 520780..521349 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  R6K63_RS02505 - 521398..522291 (-) 894 WP_003084580.1 TonB family protein -
  R6K63_RS02510 gshB 522438..523391 (-) 954 WP_023435373.1 glutathione synthase -
  R6K63_RS02515 pilG 523646..524053 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  R6K63_RS02520 pilH 524100..524465 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  R6K63_RS02525 - 524516..525052 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  R6K63_RS02530 pilJ 525137..527185 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  R6K63_RS02535 pilK 527246..528121 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=899056 R6K63_RS02515 WP_003084583.1 523646..524053(+) (pilG) [Pseudomonas aeruginosa strain CDC1270]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=899056 R6K63_RS02515 WP_003084583.1 523646..524053(+) (pilG) [Pseudomonas aeruginosa strain CDC1270]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385