Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ABEG41_RS16310 Genome accession   NZ_CP155795
Coordinates   3124563..3125432 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain D137     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3119563..3130432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEG41_RS16275 (ABEG41_16275) mrpE 3119733..3120209 (+) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  ABEG41_RS16280 (ABEG41_16280) mrpF 3120209..3120493 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ABEG41_RS16285 (ABEG41_16285) mnhG 3120477..3120851 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ABEG41_RS16290 (ABEG41_16290) yuxO 3120892..3121272 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ABEG41_RS16295 (ABEG41_16295) comA 3121291..3121935 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ABEG41_RS16300 (ABEG41_16300) - 3122016..3124329 (-) 2314 Protein_3144 histidine kinase -
  ABEG41_RS16305 (ABEG41_16305) comX 3124345..3124566 (-) 222 WP_014114983.1 competence pheromone ComX -
  ABEG41_RS16310 (ABEG41_16310) comQ 3124563..3125432 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  ABEG41_RS16315 (ABEG41_16315) degQ 3125617..3125757 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ABEG41_RS16320 (ABEG41_16320) - 3125979..3126104 (+) 126 WP_141770195.1 hypothetical protein -
  ABEG41_RS16325 (ABEG41_16325) - 3126219..3126587 (+) 369 WP_014477834.1 hypothetical protein -
  ABEG41_RS16330 (ABEG41_16330) pdeH 3126563..3127792 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  ABEG41_RS16335 (ABEG41_16335) pncB 3127929..3129401 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ABEG41_RS16340 (ABEG41_16340) pncA 3129417..3129968 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=898901 ABEG41_RS16310 WP_015714626.1 3124563..3125432(-) (comQ) [Bacillus subtilis strain D137]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=898901 ABEG41_RS16310 WP_015714626.1 3124563..3125432(-) (comQ) [Bacillus subtilis strain D137]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429