Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ABD409_RS00680 | Genome accession | NZ_CP155741 |
| Coordinates | 104252..104536 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes strain 400/03 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99252..109536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABD409_RS00655 (ABD409_00645) | - | 101198..101563 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| ABD409_RS00660 (ABD409_00650) | comGA | 101656..102594 (+) | 939 | WP_023612548.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABD409_RS00665 (ABD409_00655) | comGB | 102530..103564 (+) | 1035 | WP_229363300.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABD409_RS00670 (ABD409_00660) | comGC | 103566..103892 (+) | 327 | WP_032465607.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABD409_RS00675 (ABD409_00665) | comGD | 103867..104295 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABD409_RS00680 (ABD409_00670) | comGE | 104252..104536 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABD409_RS00685 (ABD409_00675) | comGF | 104529..104963 (+) | 435 | WP_023612536.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABD409_RS00690 (ABD409_00680) | comGG | 104947..105273 (+) | 327 | WP_002992739.1 | competence type IV pilus minor pilin ComGG | - |
| ABD409_RS00695 (ABD409_00685) | comGH | 105371..106324 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABD409_RS00700 (ABD409_00690) | - | 106383..107579 (+) | 1197 | WP_023612537.1 | acetate kinase | - |
| ABD409_RS00705 (ABD409_00695) | - | 107766..108074 (+) | 309 | WP_032465606.1 | hypothetical protein | - |
| ABD409_RS00710 (ABD409_00700) | proC | 108157..108927 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=898689 ABD409_RS00680 WP_002987779.1 104252..104536(+) (comGE) [Streptococcus pyogenes strain 400/03]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=898689 ABD409_RS00680 WP_002987779.1 104252..104536(+) (comGE) [Streptococcus pyogenes strain 400/03]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |