Detailed information NTG0089860

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK06_RS21325
• Genome accession: NZ_AP027748
• Coordinates: 4418721..4419746 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017.02.03CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4413721..4424746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK06_RS21305 (VEE50_40770)	metJ	4414782..4415099 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK06_RS21310 (VEE50_40780)	yiiX	4415283..4415891 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK06_RS21315 (VEE50_40790)	rpmE	4415952..4416164 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK06_RS21320 (VEE50_40800)	priA	4416367..4418565 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABK06_RS21325 (VEE50_40810)	cytR	4418721..4419746 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK06_RS21330 (VEE50_40820)	ftsN	4419838..4420797 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK06_RS21335 (VEE50_40830)	hslV	4420890..4421420 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK06_RS21340 (VEE50_40840)	hslU	4421430..4422761 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK06_RS21345 (VEE50_40850)	menA	4422828..4423754 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK06_RS21350 (VEE50_40860)	rraA	4423847..4424332 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK06_RS21355 (VEE50_40870)	zapB	4424417..4424662 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=89860 AABK06_RS21325 WP_000644904.1 4418721..4419746(+) (cytR) [Escherichia coli strain 2017.02.03CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=89860 AABK06_RS21325 WP_000644904.1 4418721..4419746(+) (cytR) [Escherichia coli strain 2017.02.03CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628