Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ABD406_RS04125 Genome accession   NZ_CP155738
Coordinates   795386..795862 (+) Length   158 a.a.
NCBI ID   WP_002984880.1    Uniprot ID   A0A0H2UU18
Organism   Streptococcus pyogenes strain 1510/08     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 790386..800862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABD406_RS04100 (ABD406_04080) - 790424..791212 (+) 789 WP_023611986.1 Nif3-like dinuclear metal center hexameric protein -
  ABD406_RS04105 (ABD406_04085) - 791252..792361 (+) 1110 WP_111711134.1 FAD-binding oxidoreductase -
  ABD406_RS04110 (ABD406_04090) rfbA 792419..793288 (+) 870 WP_023612014.1 glucose-1-phosphate thymidylyltransferase RfbA -
  ABD406_RS04115 (ABD406_04095) - 793288..793881 (+) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  ABD406_RS04120 (ABD406_04100) rfbB 794125..795165 (+) 1041 WP_023612000.1 dTDP-glucose 4,6-dehydratase -
  ABD406_RS04125 (ABD406_04105) mutX 795386..795862 (+) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  ABD406_RS04130 (ABD406_04110) - 795920..797101 (+) 1182 WP_011284730.1 AI-2E family transporter -
  ABD406_RS04135 (ABD406_04115) - 797091..798338 (+) 1248 WP_023611990.1 lipopolysaccharide assembly protein LapB -
  ABD406_RS04140 (ABD406_04120) fbp54 798397..800049 (-) 1653 WP_023612033.1 Rqc2 family fibronectin-binding protein Fbp54 -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18462.68 Da        Isoelectric Point: 4.3268

>NTDB_id=898425 ABD406_RS04125 WP_002984880.1 795386..795862(+) (mutX) [Streptococcus pyogenes strain 1510/08]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=898425 ABD406_RS04125 WP_002984880.1 795386..795862(+) (mutX) [Streptococcus pyogenes strain 1510/08]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UU18

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703