Detailed information NTG0089780

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ81_RS21280
• Genome accession: NZ_AP027745
• Coordinates: 4373148..4374173 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017-01-4CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4368148..4379173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ81_RS21260 (VEE70_40670)	metJ	4369209..4369526 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ81_RS21265 (VEE70_40680)	yiiX	4369710..4370318 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ81_RS21270 (VEE70_40690)	rpmE	4370379..4370591 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ81_RS21275 (VEE70_40700)	priA	4370794..4372992 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
AABJ81_RS21280 (VEE70_40710)	cytR	4373148..4374173 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ81_RS21285 (VEE70_40720)	ftsN	4374265..4375224 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ81_RS21290 (VEE70_40730)	hslV	4375317..4375847 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ81_RS21295 (VEE70_40740)	hslU	4375857..4377188 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ81_RS21300 (VEE70_40750)	menA	4377255..4378181 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ81_RS21305 (VEE70_40760)	rraA	4378274..4378759 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ81_RS21310 (VEE70_40770)	zapB	4378844..4379089 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=89780 AABJ81_RS21280 WP_000644904.1 4373148..4374173(+) (cytR) [Escherichia coli strain 2017-01-4CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=89780 AABJ81_RS21280 WP_000644904.1 4373148..4374173(+) (cytR) [Escherichia coli strain 2017-01-4CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628