Detailed information NTG0897752

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: ABDZ21_RS03305
• Genome accession: NZ_CP155721
• Coordinates: 689612..691060 (+)
• Length: 482 a.a.
• NCBI ID: WP_000778202.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2024CK-00246
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 684612..696060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDZ21_RS03305 (ABDZ21_03305)	rpoN/rpoN1	689612..691060 (+)	1449	WP_000778202.1	RNA polymerase factor sigma-54	Machinery gene
ABDZ21_RS03310 (ABDZ21_03310)	raiA	691229..691567 (+)	339	WP_001167461.1	ribosome-associated translation inhibitor RaiA	-
ABDZ21_RS03315 (ABDZ21_03315)	ibaG	691706..691957 (+)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
ABDZ21_RS03320 (ABDZ21_03320)	murA	691964..693220 (+)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABDZ21_RS03325 (ABDZ21_03325)	hisG	693220..693903 (+)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
ABDZ21_RS03330 (ABDZ21_03330)	hisD	694009..695298 (+)	1290	WP_024432284.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55082.97 Da
• Isoelectric Point: 4.6620

>NTDB_id=897752 ABDZ21_RS03305 WP_000778202.1 689612..691060(+) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00246]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=897752 ABDZ21_RS03305 WP_000778202.1 689612..691060(+) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00246]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGCTTATCTACTTTAGAACACAAAGAAACTGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTACACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTTTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATCGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAAGAACAGTTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATATCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCACCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGCCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAAG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459