Detailed information NTG0897617

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: R5H20_RS20585
• Genome accession: NZ_CP137345
• Coordinates: 4011009..4012166 (-)
• Length: 385 a.a.
• NCBI ID: WP_006639267.1
• Uniprot ID: M5P1Q6
• Organism: Bacillus sp. KICET-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4006009..4017166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5H20_RS20555 (R5H20_20555)	-	4006228..4006647 (-)	420	WP_006639262.1	TIGR03826 family flagellar region protein	-
R5H20_RS20560 (R5H20_20560)	comFC	4006705..4007439 (-)	735	WP_006639263.1	ComF family protein	Machinery gene
R5H20_RS20565 (R5H20_20565)	-	4007396..4007680 (-)	285	WP_006639264.1	late competence development ComFB family protein	-
R5H20_RS20570 (R5H20_20570)	comFA	4007737..4009083 (-)	1347	WP_006639265.1	DEAD/DEAH box helicase	Machinery gene
R5H20_RS20575 (R5H20_20575)	-	4009276..4010118 (-)	843	WP_006639266.1	DegV family protein	-
R5H20_RS20580 (R5H20_20580)	degU	4010238..4010927 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
R5H20_RS20585 (R5H20_20585)	degS	4011009..4012166 (-)	1158	WP_006639267.1	sensor histidine kinase	Regulator
R5H20_RS20590 (R5H20_20590)	-	4012388..4013026 (+)	639	WP_006639268.1	YigZ family protein	-
R5H20_RS20595 (R5H20_20595)	-	4013043..4014122 (+)	1080	WP_006639269.1	LCP family protein	-
R5H20_RS20600 (R5H20_20600)	-	4014265..4015329 (-)	1065	WP_006639270.1	glycosyltransferase family 4 protein	-
R5H20_RS20605 (R5H20_20605)	tuaH	4015452..4016633 (-)	1182	WP_006639271.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44603.33 Da
• Isoelectric Point: 7.0403

>NTDB_id=897617 R5H20_RS20585 WP_006639267.1 4011009..4012166(-) (degS) [Bacillus sp. KICET-3]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=897617 R5H20_RS20585 WP_006639267.1 4011009..4012166(-) (degS) [Bacillus sp. KICET-3]
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: M5P1Q6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894