Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   R5H20_RS06675 Genome accession   NZ_CP137345
Coordinates   1339144..1340112 (+) Length   322 a.a.
NCBI ID   WP_006636819.1    Uniprot ID   M5P9I1
Organism   Bacillus sp. KICET-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1334144..1345112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5H20_RS06650 (R5H20_06650) argF 1335893..1336843 (+) 951 WP_006636814.1 ornithine carbamoyltransferase -
  R5H20_RS06655 (R5H20_06655) - 1336977..1337156 (+) 180 WP_006636815.1 YjzC family protein -
  R5H20_RS06660 (R5H20_06660) - 1337236..1337421 (-) 186 WP_006636816.1 YjzD family protein -
  R5H20_RS06665 (R5H20_06665) - 1337660..1338394 (+) 735 WP_006636817.1 hypothetical protein -
  R5H20_RS06670 (R5H20_06670) - 1338486..1339058 (+) 573 WP_006636818.1 hypothetical protein -
  R5H20_RS06675 (R5H20_06675) med 1339144..1340112 (+) 969 WP_006636819.1 BMP family ABC transporter substrate-binding protein Regulator
  R5H20_RS06680 (R5H20_06680) comZ 1340102..1340290 (+) 189 WP_006636820.1 ComZ family protein Regulator
  R5H20_RS06685 (R5H20_06685) - 1340334..1340585 (-) 252 WP_006636821.1 hypothetical protein -
  R5H20_RS06690 (R5H20_06690) - 1340755..1341693 (+) 939 WP_006636822.1 beta-ketoacyl-ACP synthase III -
  R5H20_RS06695 (R5H20_06695) fabF 1341715..1342953 (+) 1239 WP_006636823.1 beta-ketoacyl-ACP synthase II -
  R5H20_RS06700 (R5H20_06700) - 1343034..1343822 (+) 789 WP_006636824.1 DUF2268 domain-containing protein -
  R5H20_RS06705 (R5H20_06705) - 1344001..1344975 (+) 975 WP_006636825.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35662.61 Da        Isoelectric Point: 5.2692

>NTDB_id=897571 R5H20_RS06675 WP_006636819.1 1339144..1340112(+) (med) [Bacillus sp. KICET-3]
MVYRLGVIFLILLVMSGCGQTPLNGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNEAAVKMAVED
FQKKGVNLIFGHGSEYEKVFNSISGNYPDIHFVLVNSKAEHKNVTSITFDGRAMGFFGGMTAAHQSKSGKLGILATHSWQ
PEVKGFIEGAKYINPDIKVKTEYVGQWDDSEKAVAKYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENIVLTSTIQHVDEAYELIADEFNKGTLKGGRRIFDIQDGVIEMGEFSPIVDQSFQEKIKGLIEQYKKQENCQMRGDPD
AA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=897571 R5H20_RS06675 WP_006636819.1 1339144..1340112(+) (med) [Bacillus sp. KICET-3]
ATGGTGTACAGGCTTGGCGTGATTTTTTTGATTCTCCTTGTCATGAGCGGCTGCGGACAAACGCCGCTGAATGGGAAAAT
TGAAAAAGTCGGGTTGCTTGTCCCTGATACAATAAGCGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAGTCTGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGAAGCCGCAGTCAAAATGGCTGTAGAAGAC
TTTCAGAAAAAAGGCGTCAACTTAATTTTCGGACATGGAAGCGAATATGAAAAAGTGTTTAACAGCATAAGCGGAAACTA
TCCCGATATTCATTTTGTGCTGGTGAACAGCAAAGCCGAGCATAAAAATGTGACAAGCATCACCTTTGACGGAAGGGCGA
TGGGGTTTTTTGGCGGCATGACCGCTGCACATCAATCAAAGTCGGGGAAACTCGGCATACTGGCCACACATTCGTGGCAG
CCTGAAGTGAAAGGATTCATCGAAGGTGCGAAATACATCAATCCGGACATTAAGGTCAAAACAGAATATGTCGGGCAGTG
GGACGACTCCGAAAAGGCCGTCGCCAAGTATGAAAAGATGAAAAAAGCGGGCGCGGATGTTGTGTATCCCGCCGGGGACG
GGTATAATGTCCCTGTCATAGAACAAATCAAAAAAGACGGTCTTTATGCGATCGGCTATGTCAGCGACCAGTCGGAGCTG
GGCGAGAACATCGTGCTCACAAGCACCATTCAGCATGTTGATGAAGCTTATGAGCTCATCGCAGACGAATTCAATAAAGG
GACGCTTAAGGGCGGCCGGCGGATTTTTGACATTCAGGACGGTGTGATAGAGATGGGCGAATTCAGCCCGATTGTCGATC
AGTCATTCCAGGAAAAAATAAAAGGGCTTATCGAACAATACAAAAAACAGGAAAACTGCCAAATGAGAGGTGATCCAGAT
GCAGCATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P9I1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

66.343

95.963

0.637