Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ABC804_RS02360 Genome accession   NZ_CP155536
Coordinates   419123..419833 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain M264-3     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 414123..424833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC804_RS02340 (ABC804_02340) amiD 414619..415545 (+) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator
  ABC804_RS02345 (ABC804_02345) amiE 415554..416621 (+) 1068 WP_000159555.1 ABC transporter ATP-binding protein Regulator
  ABC804_RS02350 (ABC804_02350) - 416632..417558 (+) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  ABC804_RS02355 (ABC804_02355) - 417633..418968 (-) 1336 Protein_407 ISL3 family transposase -
  ABC804_RS02360 (ABC804_02360) treR 419123..419833 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  ABC804_RS02365 (ABC804_02365) treP 420018..421985 (+) 1968 WP_000514312.1 PTS system trehalose-specific EIIBC component -
  ABC804_RS02370 (ABC804_02370) treC 422163..423788 (+) 1626 WP_000171215.1 alpha,alpha-phosphotrehalase -
  ABC804_RS02375 (ABC804_02375) - 424044..424292 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=897164 ABC804_RS02360 WP_000760673.1 419123..419833(-) (treR) [Streptococcus pneumoniae strain M264-3]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=897164 ABC804_RS02360 WP_000760673.1 419123..419833(-) (treR) [Streptococcus pneumoniae strain M264-3]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593