Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ABC811_RS07465 Genome accession   NZ_CP155535
Coordinates   1448178..1448444 (-) Length   88 a.a.
NCBI ID   WP_001818764.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1443178..1453444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS07455 (ABC811_07450) metF 1444738..1445604 (-) 867 WP_000089976.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  ABC811_RS07460 (ABC811_07455) metE 1445668..1447917 (-) 2250 WP_000108203.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ABC811_RS07465 (ABC811_07460) HI0659 1448178..1448444 (-) 267 WP_001818764.1 helix-turn-helix transcriptional regulator Machinery gene
  ABC811_RS07470 (ABC811_07465) - 1448528..1449016 (-) 489 Protein_1477 IS30 family transposase -
  ABC811_RS07475 (ABC811_07470) - 1449172..1450173 (+) 1002 WP_000597994.1 endonuclease/exonuclease/phosphatase family protein -
  ABC811_RS07480 (ABC811_07475) pheT 1450346..1452751 (-) 2406 WP_000961596.1 phenylalanine--tRNA ligase subunit beta -
  ABC811_RS07485 (ABC811_07480) - 1452828..1453337 (-) 510 WP_000619941.1 N-acetyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9627.08 Da        Isoelectric Point: 4.2720

>NTDB_id=897056 ABC811_RS07465 WP_001818764.1 1448178..1448444(-) (HI0659) [Streptococcus pneumoniae strain PJ755/1]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=897056 ABC811_RS07465 WP_001818764.1 1448178..1448444(-) (HI0659) [Streptococcus pneumoniae strain PJ755/1]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

57.143

87.5

0.5