Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ABC799_RS02105 Genome accession   NZ_CP155534
Coordinates   383162..383872 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain DCC1476     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 378162..388872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC799_RS02085 (ABC799_02085) - 379070..379996 (+) 927 WP_001291294.1 ATP-binding cassette domain-containing protein -
  ABC799_RS02090 (ABC799_02090) - 380487..381424 (+) 938 Protein_361 ABC transporter substrate-binding protein -
  ABC799_RS02095 (ABC799_02095) - 381436..382313 (+) 878 Protein_362 ABC transporter permease -
  ABC799_RS02100 (ABC799_02100) - 382326..383129 (+) 804 WP_000157672.1 ATP-binding cassette domain-containing protein -
  ABC799_RS02105 (ABC799_02105) treR 383162..383872 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  ABC799_RS02110 (ABC799_02110) treP 384057..386024 (+) 1968 WP_000514304.1 PTS system trehalose-specific EIIBC component -
  ABC799_RS02115 (ABC799_02115) treC 386202..387827 (+) 1626 WP_000171211.1 alpha,alpha-phosphotrehalase -
  ABC799_RS02120 (ABC799_02120) - 387969..388217 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=896920 ABC799_RS02105 WP_000760673.1 383162..383872(-) (treR) [Streptococcus pneumoniae strain DCC1476]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=896920 ABC799_RS02105 WP_000760673.1 383162..383872(-) (treR) [Streptococcus pneumoniae strain DCC1476]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTCATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGGCGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593