Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | ABC814_RS02640 | Genome accession | NZ_CP155533 |
| Coordinates | 507715..507864 (+) | Length | 49 a.a. |
| NCBI ID | WP_001818346.1 | Uniprot ID | Q9FBH1 |
| Organism | Streptococcus pneumoniae strain Spn1439-106 | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
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Genomic Context
Location: 502715..512864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC814_RS02590 (ABC814_02590) | blpI | 502750..502947 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| ABC814_RS02595 (ABC814_02595) | blpJ | 503414..503683 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| ABC814_RS02600 (ABC814_02600) | blpU | 503752..503982 (+) | 231 | WP_000379967.1 | bacteriocin-like peptide BlpU | - |
| ABC814_RS02605 (ABC814_02605) | - | 503985..504104 (+) | 120 | WP_000346298.1 | PncF family bacteriocin immunity protein | - |
| ABC814_RS02610 (ABC814_02610) | - | 504401..504565 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| ABC814_RS02615 (ABC814_02615) | - | 504562..504966 (+) | 405 | WP_000846944.1 | hypothetical protein | - |
| ABC814_RS02620 (ABC814_02620) | - | 505067..505881 (+) | 815 | Protein_515 | IS5-like element IS1515 family transposase | - |
| ABC814_RS02625 (ABC814_02625) | - | 506042..506848 (+) | 807 | Protein_516 | IS5 family transposase | - |
| ABC814_RS02630 (ABC814_02630) | blpM | 506998..507252 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| ABC814_RS02635 (ABC814_02635) | blpN | 507268..507471 (+) | 204 | WP_001099491.1 | two-peptide bacteriocin subunit BlpN | - |
| ABC814_RS02640 (ABC814_02640) | cipB | 507715..507864 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| ABC814_RS02645 (ABC814_02645) | - | 507968..508087 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| ABC814_RS02650 (ABC814_02650) | - | 508873..509256 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| ABC814_RS02655 (ABC814_02655) | - | 509308..509997 (+) | 690 | WP_000760532.1 | CPBP family intramembrane glutamic endopeptidase | - |
| ABC814_RS02660 (ABC814_02660) | blpZ | 510039..510287 (+) | 249 | WP_000276509.1 | immunity protein BlpZ | - |
| ABC814_RS02665 (ABC814_02665) | - | 510317..510928 (+) | 612 | WP_000394040.1 | type II CAAX endopeptidase family protein | - |
| ABC814_RS02670 (ABC814_02670) | ccrZ | 511090..511884 (+) | 795 | WP_000363002.1 | cell cycle regulator CcrZ | - |
| ABC814_RS02675 (ABC814_02675) | trmB | 511881..512516 (+) | 636 | WP_001266078.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Sequence
Protein
Download Length: 49 a.a. Molecular weight: 5134.91 Da Isoelectric Point: 3.9133
>NTDB_id=896781 ABC814_RS02640 WP_001818346.1 507715..507864(+) (cipB) [Streptococcus pneumoniae strain Spn1439-106]
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCAAGVAYGAIDGCATTV
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCAAGVAYGAIDGCATTV
Nucleotide
Download Length: 150 bp
>NTDB_id=896781 ABC814_RS02640 WP_001818346.1 507715..507864(+) (cipB) [Streptococcus pneumoniae strain Spn1439-106]
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTGCAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTGCAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
51.02 |
100 |
0.51 |