Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | LDN16_RS04925 | Genome accession | NZ_AP024961 |
| Coordinates | 1079445..1080029 (+) | Length | 194 a.a. |
| NCBI ID | WP_027266404.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain 80-045 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1074445..1085029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN16_RS04905 (LEG80045_09470) | ravI | 1075795..1076802 (-) | 1008 | WP_061637670.1 | Dot/Icm T4SS effector RavI | - |
| LDN16_RS04910 (LEG80045_09480) | pilM | 1077219..1078283 (+) | 1065 | WP_011215094.1 | type IV pilus assembly protein PilM | Machinery gene |
| LDN16_RS04915 (LEG80045_09490) | pilN | 1078287..1078835 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| LDN16_RS04920 (LEG80045_09500) | pilO | 1078849..1079448 (+) | 600 | WP_011215096.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LDN16_RS04925 (LEG80045_09510) | pilP | 1079445..1080029 (+) | 585 | WP_027266404.1 | pilus assembly protein PilP | Machinery gene |
| LDN16_RS04930 (LEG80045_09520) | pilQ | 1080033..1082129 (+) | 2097 | WP_011215098.1 | type IV pilus secretin PilQ | Machinery gene |
| LDN16_RS04935 (LEG80045_09530) | aroK | 1082575..1083102 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LDN16_RS04940 (LEG80045_09540) | aroB | 1083089..1084198 (+) | 1110 | WP_223919089.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 22040.59 Da Isoelectric Point: 10.4471
>NTDB_id=89652 LDN16_RS04925 WP_027266404.1 1079445..1080029(+) (pilP) [Legionella pneumophila strain 80-045]
MIIKNNQTLILGFFGNSLRVSLTAATFRKSLLTGLLVLLLSACSGDSSDLVKYINEVKSRPGRPIEPIPKFAPLPIFRFP
ENDNRRNPFKPIDQKKRNDIYAPDKKRPKQPLESFPLDALKFVGTLKKDNEIWALIKQPDGQISRVRVGDYMGQNYGRII
LIKNDLIKLEETVQKSGTWEKQSTTINLDTGKQE
MIIKNNQTLILGFFGNSLRVSLTAATFRKSLLTGLLVLLLSACSGDSSDLVKYINEVKSRPGRPIEPIPKFAPLPIFRFP
ENDNRRNPFKPIDQKKRNDIYAPDKKRPKQPLESFPLDALKFVGTLKKDNEIWALIKQPDGQISRVRVGDYMGQNYGRII
LIKNDLIKLEETVQKSGTWEKQSTTINLDTGKQE
Nucleotide
Download Length: 585 bp
>NTDB_id=89652 LDN16_RS04925 WP_027266404.1 1079445..1080029(+) (pilP) [Legionella pneumophila strain 80-045]
ATGATAATTAAAAATAACCAGACGCTTATATTAGGCTTTTTCGGAAATTCTCTGCGTGTTTCACTCACAGCAGCGACTTT
CCGAAAAAGTCTATTGACTGGGTTATTGGTACTATTACTTAGTGCCTGCTCTGGTGATAGCAGTGACCTTGTTAAGTACA
TCAACGAAGTGAAATCAAGACCAGGAAGACCTATCGAGCCTATTCCCAAATTCGCCCCTTTGCCAATTTTTAGATTTCCA
GAAAACGACAATAGGCGAAATCCATTCAAGCCTATTGATCAAAAAAAGAGAAATGATATTTATGCCCCAGATAAAAAAAG
GCCTAAGCAGCCTTTGGAATCTTTTCCTCTGGATGCTTTAAAATTTGTAGGTACTTTAAAAAAAGACAATGAAATCTGGG
CTCTGATTAAACAACCTGACGGTCAGATTAGCCGTGTTAGGGTTGGAGATTACATGGGACAAAATTATGGACGTATTATT
TTGATTAAAAATGATCTCATTAAATTGGAAGAAACTGTACAGAAATCAGGAACGTGGGAAAAACAGTCCACCACAATTAA
TTTGGATACTGGCAAGCAGGAGTGA
ATGATAATTAAAAATAACCAGACGCTTATATTAGGCTTTTTCGGAAATTCTCTGCGTGTTTCACTCACAGCAGCGACTTT
CCGAAAAAGTCTATTGACTGGGTTATTGGTACTATTACTTAGTGCCTGCTCTGGTGATAGCAGTGACCTTGTTAAGTACA
TCAACGAAGTGAAATCAAGACCAGGAAGACCTATCGAGCCTATTCCCAAATTCGCCCCTTTGCCAATTTTTAGATTTCCA
GAAAACGACAATAGGCGAAATCCATTCAAGCCTATTGATCAAAAAAAGAGAAATGATATTTATGCCCCAGATAAAAAAAG
GCCTAAGCAGCCTTTGGAATCTTTTCCTCTGGATGCTTTAAAATTTGTAGGTACTTTAAAAAAAGACAATGAAATCTGGG
CTCTGATTAAACAACCTGACGGTCAGATTAGCCGTGTTAGGGTTGGAGATTACATGGGACAAAATTATGGACGTATTATT
TTGATTAAAAATGATCTCATTAAATTGGAAGAAACTGTACAGAAATCAGGAACGTGGGAAAAACAGTCCACCACAATTAA
TTTGGATACTGGCAAGCAGGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Legionella pneumophila strain ERS1305867 |
94.845 |
100 |
0.948 |