Detailed information NTG0896401

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: R5L00_RS07185
• Genome accession: NZ_CP137134
• Coordinates: 1638244..1639227 (+)
• Length: 327 a.a.
• NCBI ID: WP_317653965.1
• Uniprot ID: A0AAU0KN56
• Organism: Nitrosospira sp. Is2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1633244..1644227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5L00_RS07155 (R5L00_07155)	-	1633299..1634030 (+)	732	WP_317653960.1	YggS family pyridoxal phosphate-dependent enzyme	-
R5L00_RS07160 (R5L00_07160)	-	1633996..1634259 (-)	264	WP_107694628.1	YfhL family 4Fe-4S dicluster ferredoxin	-
R5L00_RS07165 (R5L00_07165)	coaD	1634267..1634752 (-)	486	WP_107694629.1	pantetheine-phosphate adenylyltransferase	-
R5L00_RS07170 (R5L00_07170)	rsmD	1634721..1635290 (-)	570	WP_317653963.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
R5L00_RS07175 (R5L00_07175)	-	1635351..1636661 (-)	1311	WP_317653964.1	pitrilysin family protein	-
R5L00_RS07180 (R5L00_07180)	-	1636732..1638138 (-)	1407	WP_411555611.1	M16 family metallopeptidase	-
R5L00_RS07185 (R5L00_07185)	pilA	1638244..1639227 (+)	984	WP_317653965.1	signal recognition particle-docking protein FtsY	Machinery gene
R5L00_RS07190 (R5L00_07190)	ftsE	1639255..1639908 (+)	654	WP_107694633.1	cell division ATP-binding protein FtsE	-
R5L00_RS07195 (R5L00_07195)	ftsX	1639905..1640813 (+)	909	WP_107694634.1	permease-like cell division protein FtsX	-
R5L00_RS07200 (R5L00_07200)	rpoH	1640910..1641758 (+)	849	WP_107694635.1	RNA polymerase sigma factor RpoH	-
R5L00_RS07205 (R5L00_07205)	-	1641884..1642132 (-)	249	WP_107694636.1	BolA family protein	-
R5L00_RS07210 (R5L00_07210)	-	1642205..1642960 (-)	756	WP_107694637.1	ABC transporter permease	-
R5L00_RS07215 (R5L00_07215)	-	1642957..1643883 (-)	927	WP_107694638.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35012.08 Da
• Isoelectric Point: 7.0807

>NTDB_id=896401 R5L00_RS07185 WP_317653965.1 1638244..1639227(+) (pilA) [Nitrosospira sp. Is2]
MPSFFNSKNNTETADSPSHWAARVRSGLSRTRQNLGKHLSGLFGSGKIDEALYEELETVLLMADTGVSSTTWLLDELRRQ
VKRNGLTQAAQLKEALQEALIALLEPLSLPLETGASKPFIIMLAGVNGAGKTTSIGKLAHHFQLQGKTVLLAAGDTFRAA
AREQLMAWGERNNIAVIAQENTGQQKGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKAEPGA
PHESLLVLDANTGQNAIAQVQAFDDALGLTGLIVTKLDGTAKGGVIAAIARQRQDKQPLPIRFIGVGEGLDDLRPFAARE
FVEALFD

Nucleotide

• Length: 984 bp

>NTDB_id=896401 R5L00_RS07185 WP_317653965.1 1638244..1639227(+) (pilA) [Nitrosospira sp. Is2]
ATGCCGAGTTTCTTCAACTCTAAAAATAATACCGAGACCGCGGACTCCCCTTCCCATTGGGCGGCAAGGGTAAGATCCGG
ACTCTCGCGCACCCGCCAAAACCTGGGTAAACACTTATCCGGTCTCTTCGGCAGCGGCAAAATCGACGAAGCCCTCTACG
AGGAGCTGGAAACCGTCCTGCTCATGGCCGACACTGGTGTGAGCTCGACCACTTGGCTGCTCGACGAACTGCGCAGGCAA
GTCAAACGCAATGGACTGACCCAGGCGGCGCAACTCAAGGAAGCATTGCAGGAAGCACTCATCGCGCTGCTTGAACCCCT
GTCGCTACCTCTTGAAACTGGGGCCAGCAAGCCTTTCATCATTATGCTTGCGGGTGTGAACGGCGCCGGAAAAACAACAT
CCATTGGTAAACTTGCGCATCATTTTCAGCTACAGGGAAAAACCGTGCTGCTCGCGGCCGGCGACACTTTTCGGGCGGCT
GCGCGCGAGCAGCTTATGGCGTGGGGCGAGCGTAATAATATCGCTGTGATTGCGCAGGAAAATACCGGGCAGCAAAAAGG
GGATCCTGCCGCCGTTATATTCGATGCGGTCAACGCGGCGAAAGCTCGCGGGATCGATATCGTCCTCGCGGACACTGCCG
GGCGGCTGGCAACGCAATTGCATCTCATGGAAGAAATCAAGAAAGTGAAGCGGGTCATTGCCAAGGCAGAGCCGGGCGCG
CCGCATGAATCGCTGCTGGTGCTCGATGCAAATACCGGCCAGAATGCCATTGCTCAGGTTCAAGCGTTCGATGATGCGCT
TGGTTTGACCGGCCTCATCGTCACAAAGCTGGATGGCACTGCCAAAGGAGGGGTGATCGCCGCTATCGCCAGGCAACGCC
AGGACAAGCAGCCACTACCCATCCGCTTTATCGGGGTAGGCGAGGGCTTGGACGATTTGAGGCCGTTTGCTGCAAGGGAA
TTTGTGGAGGCGTTGTTTGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (118-326)

• SRP54-type protein, helical bundle domain (SRP54_N) (35-100)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	66.343	94.495	0.627