NTDB

Overview

Name	rcrP	Type	Regulator
Locus tag	R4701_RS06965	Genome accession	NZ_CP137114
Coordinates	1367642..1368463 (+)	Length	273 a.a.
NCBI ID	WP_000601682.1	Uniprot ID	A0A4K3G7N8
Organism	Streptococcus pneumoniae strain 15P3054
Function	regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 1362642..1373463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4701_RS06940	-	1363000..1363608 (+)	609	WP_317805826.1	hypothetical protein	-
R4701_RS06945	-	1363601..1364011 (+)	411	WP_000595762.1	hypothetical protein	-
R4701_RS06950	ply	1364022..1365431 (+)	1410	WP_001284356.1	cholesterol-dependent cytolysin pneumolysin	-
R4701_RS06955	-	1366314..1367030 (+)	717	WP_000532876.1	YebC/PmpR family DNA-binding transcriptional regulator	-
R4701_RS06960	-	1367154..1367625 (+)	472	Protein_1347	MarR family winged helix-turn-helix transcriptional regulator	-
R4701_RS06965	rcrP	1367642..1368463 (+)	822	WP_000601682.1	ABC transporter permease	Regulator
R4701_RS06970	-	1368656..1369501 (+)	846	Protein_1349	ATP-binding cassette domain-containing protein	-
R4701_RS06975	-	1369567..1369929 (+)	363	WP_000078804.1	DUF2200 domain-containing protein	-
R4701_RS06980	-	1369926..1370429 (+)	504	WP_000800943.1	phosphatase PAP2 family protein	-
R4701_RS06985	-	1370543..1370989 (+)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
R4701_RS06990	-	1370994..1371668 (+)	675	WP_000725719.1	LiaF transmembrane domain-containing protein	-
R4701_RS06995	-	1371829..1372020 (+)	192	WP_000291826.1	cell wall-binding protein	-
R4701_RS07000	-	1372027..1372107 (+)	81	WP_223200442.1	hypothetical protein	-
R4701_RS07005	-	1372305..1372604 (+)	300	WP_001013974.1	DUF4651 domain-containing protein	-
R4701_RS07010	-	1372601..1372918 (+)	318	WP_000615767.1	thioredoxin family protein	-

Sequence

Protein

Download Length: 273 a.a. Molecular weight: 30604.17 Da Isoelectric Point: 5.9310

                                >NTDB_id=896201 R4701_RS06965 WP_000601682.1 1367642..1368463(+) (rcrP) [Streptococcus pneumoniae strain 15P3054]

MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI

FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV

LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV

AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide

Download Length: 822 bp

                                >NTDB_id=896201 R4701_RS06965 WP_000601682.1 1367642..1368463(+) (rcrP) [Streptococcus pneumoniae strain 15P3054]

ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC

GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG

CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT

TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA

CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG

GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT

TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT

AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA

CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA

GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT

TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-271)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A4K3G7N8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
rcrP	Streptococcus mutans UA159	56.842	100	0.593

Detailed information NTG0896201