Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   R4707_RS05805 Genome accession   NZ_CP137113
Coordinates   1088856..1089614 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain ZGX     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1083856..1094614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4707_RS05775 comE 1084453..1085205 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  R4707_RS05780 comD/comD1 1085202..1086527 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  R4707_RS05785 comC/comC1 1086548..1086673 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  R4707_RS05795 rlmH 1086955..1087434 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  R4707_RS05800 htrA 1087617..1088798 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  R4707_RS05805 spo0J 1088856..1089614 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  R4707_RS05810 dnaA 1089827..1091188 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  R4707_RS05815 dnaN 1091347..1092483 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  R4707_RS05820 - 1092548..1092742 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  R4707_RS05825 ychF 1092826..1093941 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  R4707_RS05830 pth 1094012..1094581 (+) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=896120 R4707_RS05805 WP_000410378.1 1088856..1089614(+) (spo0J) [Streptococcus pneumoniae strain ZGX]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=896120 R4707_RS05805 WP_000410378.1 1088856..1089614(+) (spo0J) [Streptococcus pneumoniae strain ZGX]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508