Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   R4707_RS04035 Genome accession   NZ_CP137113
Coordinates   753558..754379 (-) Length   273 a.a.
NCBI ID   WP_000601683.1    Uniprot ID   A0A0B7LII6
Organism   Streptococcus pneumoniae strain ZGX     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 748558..759379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4707_RS03990 - 749046..749363 (-) 318 WP_000615776.1 thioredoxin family protein -
  R4707_RS03995 - 749360..749659 (-) 300 WP_001818001.1 DUF4651 domain-containing protein -
  R4707_RS04000 - 749753..749884 (+) 132 WP_001811306.1 hypothetical protein -
  R4707_RS11405 - 749996..750191 (-) 196 Protein_771 cell wall-binding protein -
  R4707_RS04010 - 750352..751026 (-) 675 WP_081543159.1 LiaF transmembrane domain-containing protein -
  R4707_RS04015 - 751032..751478 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  R4707_RS04020 - 751592..752095 (-) 504 WP_044789202.1 phosphatase PAP2 family protein -
  R4707_RS04025 - 752092..752454 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  R4707_RS04030 rcrQ 752520..753551 (-) 1032 WP_050206160.1 ABC transporter ATP-binding protein/permease Regulator
  R4707_RS04035 rcrP 753558..754379 (-) 822 WP_000601683.1 ABC transporter permease Regulator
  R4707_RS04040 - 754396..754867 (-) 472 Protein_778 MarR family winged helix-turn-helix transcriptional regulator -
  R4707_RS04045 - 754991..755707 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  R4707_RS04050 ply 756588..758003 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  R4707_RS04055 - 758014..758424 (-) 411 WP_000595758.1 hypothetical protein -
  R4707_RS04060 - 758417..759025 (-) 609 WP_000083617.1 hypothetical protein -

Sequence

Protein


Download         Length: 273 a.a.        Molecular weight: 30590.15 Da        Isoelectric Point: 5.9310

>NTDB_id=896090 R4707_RS04035 WP_000601683.1 753558..754379(-) (rcrP) [Streptococcus pneumoniae strain ZGX]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIVFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=896090 R4707_RS04035 WP_000601683.1 753558..754379(-) (rcrP) [Streptococcus pneumoniae strain ZGX]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTGT
TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7LII6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.193

100

0.597