Detailed information NTG0896055

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: R4700_RS08275
• Genome accession: NZ_CP137112
• Coordinates: 1606058..1606324 (+)
• Length: 88 a.a.
• NCBI ID: WP_061364084.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 02H2025
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1605486..1605980	1606058..1606324	flank	78

Gene organization within MGE regions

Location: 1605486..1606324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4700_RS08270	-	1605486..1605974 (+)	489	Protein_1586	transposase	-
R4700_RS08275	HI0659	1606058..1606324 (+)	267	WP_061364084.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9610.15 Da
• Isoelectric Point: 4.6512

>NTDB_id=896055 R4700_RS08275 WP_061364084.1 1606058..1606324(+) (HI0659) [Streptococcus pneumoniae strain 02H2025]
MEGCPSELFSKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=896055 R4700_RS08275 WP_061364084.1 1606058..1606324(+) (HI0659) [Streptococcus pneumoniae strain 02H2025]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATTATGAGCGAGTT
GATTGAAGCTAGACATGAACAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	62.338	87.5	0.545