Detailed information NTG0895985

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AAFX13_RS10760
• Genome accession: NZ_CP155084
• Coordinates: 454635..456839 (-)
• Length: 734 a.a.
• NCBI ID: WP_411062582.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain TBV028
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 449635..461839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX13_RS10735 (AAFX13_10735)	-	449855..450079 (+)	225	WP_029864913.1	hypothetical protein	-
AAFX13_RS10740 (AAFX13_10740)	hslU	450504..451835 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
AAFX13_RS10745 (AAFX13_10745)	hslV	451859..452410 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
AAFX13_RS10750 (AAFX13_10750)	ftsN	452574..453119 (-)	546	WP_005481405.1	cell division protein FtsN	-
AAFX13_RS10755 (AAFX13_10755)	cytR	453295..454341 (-)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
AAFX13_RS10760 (AAFX13_10760)	priA	454635..456839 (-)	2205	WP_411062582.1	primosomal protein N'	Machinery gene
AAFX13_RS10765 (AAFX13_10765)	rpmE	457134..457355 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
AAFX13_RS10770 (AAFX13_10770)	rpsJ	457815..458126 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
AAFX13_RS10775 (AAFX13_10775)	rplC	458141..458770 (+)	630	WP_005456132.1	50S ribosomal protein L3	-
AAFX13_RS10780 (AAFX13_10780)	rplD	458788..459390 (+)	603	WP_005379556.1	50S ribosomal protein L4	-
AAFX13_RS10785 (AAFX13_10785)	rplW	459387..459689 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
AAFX13_RS10790 (AAFX13_10790)	rplB	459705..460529 (+)	825	WP_005489461.1	50S ribosomal protein L2	-
AAFX13_RS10795 (AAFX13_10795)	rpsS	460551..460829 (+)	279	WP_004394525.1	30S ribosomal protein S19	-
AAFX13_RS10800 (AAFX13_10800)	rplV	460840..461172 (+)	333	WP_005383164.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82223.87 Da
• Isoelectric Point: 8.6765

>NTDB_id=895985 AAFX13_RS10760 WP_411062582.1 454635..456839(-) (priA) [Vibrio parahaemolyticus strain TBV028]
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQLKPIKAVLDSQPVWPEKLYS
LLIWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAVKQQKVLQMLVNGALPHQEFVDQ
EIASAVLKSLEEKGWIERIEKKPVITKWGQHVECDVEKPKLNHEQALAIASVNSQAGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTSNKVLDVKGQYL
ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=895985 AAFX13_RS10760 WP_411062582.1 454635..456839(-) (priA) [Vibrio parahaemolyticus strain TBV028]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCAGGACACCTGTT
TCCTATCATTGGCGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGATTTCCCCAAAGATCAACTCAAGCCAATCAAAGCAGTTCTTGATTCTCAGCCGGTATGGCCTGAAAAGCTTTATTCG
TTGCTGATTTGGTGCAGCCAGTTCTACCAATACCCACTTGGAGATACGCTACACAATGCGATGCCAGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCAAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGGTCAAACAACAAAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAGCTGTACTAAAGTCTTTAGAAGAGAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGTAATCACCAA
GTGGGGGCAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTAGCTATTGCGAGTGTAAATA
GCCAAGCAGGTTTTGCCTGCTATTTACTAGAAGGCGTCACGGGCTCAGGTAAGACAGAAGTGTACCTCAACCTGATCAAA
CCGGTCTTAGAGAAAGGTAAACAAGCCTTGGTTTTAGTACCAGAGATTGGCTTAACACCACAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCAGTTGACGTTATCCACTCCGGATTAAACGAGACGGAGCGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACACGCTCTGCCCTACTCGCGCCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCTCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCTACACCTGCACTGGAGACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTTCTAATAAAGTGCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGCAAACACCTTAAAGCAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGCCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGCTGCCACCATTGTGGCTCGCAGCAACCAGTGATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTAGAACAACAATTGGCACAATTGTTTCCCGAATACAA
AGCCATCCGAATAGACAGGGATAGCACGCGCCGAAAAGGCAGCTTAGAAGACGCGTTGGAATCCATCCGTAAGGGTGAAT
ATCAAATTTTGATTGGCACTCAAATGTTGGCTAAGGGACACCATTTCCCCAATGTAACGCTCGTCGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCGCAGCTATTCATTCAAGTCGCAGGGCGAGCCGG
ACGTGCAAGTAAGCCGGGGGAAGTGGTTTTGCAGACTCACCATCCTGAGCACAGTTTGTTGCAAGCCTTATTGGAAAAGG
ACTACCGACACTTCGCTATGACGGCATTAGAGGAACGTAAACTGGCGCAGTTGCCACCGTACAGTTTCCTTACTCTATTT
AAAGCCGAAGCAAATCAGAGCGAGATCGTAGAAGATTTTCTGCGCCAAGTTCGCTTTACCTTAGAATCGCACCCTTTGTT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCTCTCGCCAAACGCGCAGGCAAATACCGTTGGCAACTCTTGC
TGCAAACCCAACACCGGTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTACCTAATGCCAAG
AAAGTACGTTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• DEAD/DEAH box helicase (DEAD) (220-365)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.419	100	0.436
priA	Bacillus subtilis subsp. subtilis str. 168	34.257	100	0.371