Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABC966_RS01705 Genome accession   NZ_CP155062
Coordinates   398143..398988 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CC130-MRSA-XI     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 393143..403988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC966_RS01690 (ABC966_01690) - 393409..395250 (-) 1842 WP_001071332.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ABC966_RS01695 (ABC966_01695) metC 395219..396379 (-) 1161 WP_000175848.1 cystathionine beta-lyase MetC -
  ABC966_RS01700 (ABC966_01700) - 396376..397479 (-) 1104 WP_046597214.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ABC966_RS01705 (ABC966_01705) spo0J 398143..398988 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  ABC966_RS01710 (ABC966_01710) - 399142..400023 (+) 882 WP_000373075.1 mechanosensitive ion channel family protein -
  ABC966_RS01715 (ABC966_01715) - 400053..400256 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ABC966_RS01720 (ABC966_01720) ychF 400268..401365 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ABC966_RS01725 (ABC966_01725) - 401451..401642 (-) 192 WP_001052483.1 hypothetical protein -
  ABC966_RS01730 (ABC966_01730) rpsF 401886..402182 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ABC966_RS01735 (ABC966_01735) ssb 402203..402706 (+) 504 WP_000934799.1 single-stranded DNA-binding protein -
  ABC966_RS01740 (ABC966_01740) rpsR 402758..403000 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=895796 ABC966_RS01705 WP_001621659.1 398143..398988(+) (spo0J) [Staphylococcus aureus strain CC130-MRSA-XI]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=895796 ABC966_RS01705 WP_001621659.1 398143..398988(+) (spo0J) [Staphylococcus aureus strain CC130-MRSA-XI]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTACAAGGCTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381