Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   R4715_RS02730 Genome accession   NZ_CP137108
Coordinates   561979..562710 (-) Length   243 a.a.
NCBI ID   WP_000889919.1    Uniprot ID   A0A062WNF5
Organism   Streptococcus pneumoniae strain OXT     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 556979..567710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4715_RS02705 - 557726..559066 (-) 1341 WP_001028654.1 sensor histidine kinase -
  R4715_RS02710 comE/blpR 559080..559817 (-) 738 WP_001219121.1 response regulator transcription factor Regulator
  R4715_RS02715 - 559822..560160 (-) 339 WP_000876675.1 LytTR family DNA-binding domain-containing protein -
  R4715_RS02720 - 560436..560765 (+) 330 WP_000132572.1 hypothetical protein -
  R4715_RS02725 - 560933..561982 (-) 1050 WP_000653766.1 ABC transporter permease -
  R4715_RS02730 pptA 561979..562710 (-) 732 WP_000889919.1 ABC transporter ATP-binding protein Regulator
  R4715_RS02735 - 562778..563188 (+) 411 WP_001278301.1 HIT family protein -
  R4715_RS02740 - 563198..563485 (+) 288 WP_000777760.1 hypothetical protein -
  R4715_RS02745 - 563647..563886 (+) 240 WP_001812223.1 hypothetical protein -
  R4715_RS02750 dnaJ 564208..565344 (-) 1137 WP_001066301.1 molecular chaperone DnaJ -
  R4715_RS02755 - 565549..565902 (-) 354 WP_000115730.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27012.49 Da        Isoelectric Point: 4.7737

>NTDB_id=895690 R4715_RS02730 WP_000889919.1 561979..562710(-) (pptA) [Streptococcus pneumoniae strain OXT]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=895690 R4715_RS02730 WP_000889919.1 561979..562710(-) (pptA) [Streptococcus pneumoniae strain OXT]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAGATGTTCCGTCTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGCCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WNF5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712