Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   AAHT64_RS01695 Genome accession   NZ_CP155054
Coordinates   335745..336878 (+) Length   377 a.a.
NCBI ID   WP_003227715.1    Uniprot ID   P70962
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 330745..341878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS01665 (AAHT64_01665) ywmC 331542..332225 (+) 684 WP_003227700.1 VWA domain-containing protein -
  AAHT64_RS01670 (AAHT64_01670) - 332356..332496 (+) 141 WP_003227702.1 hypothetical protein -
  AAHT64_RS01675 (AAHT64_01675) ywmD 332549..333223 (+) 675 WP_003243553.1 VWA domain-containing protein -
  AAHT64_RS01680 (AAHT64_01680) - 333317..333478 (+) 162 WP_003227706.1 hypothetical protein -
  AAHT64_RS01685 (AAHT64_01685) fdhD 333724..334512 (+) 789 WP_003227709.1 formate dehydrogenase accessory sulfurtransferase FdhD -
  AAHT64_RS01690 (AAHT64_01690) moaA 334528..335553 (+) 1026 WP_345835170.1 GTP 3',8-cyclase MoaA -
  AAHT64_RS01695 (AAHT64_01695) rapC 335745..336878 (+) 1134 WP_003227715.1 response regulator aspartate phosphatase RapB Regulator
  AAHT64_RS01700 (AAHT64_01700) - 337034..337513 (+) 480 WP_003244390.1 hypothetical protein -
  AAHT64_RS01705 (AAHT64_01705) csbD 337586..337774 (+) 189 WP_003227718.1 stress response protein CsbD -
  AAHT64_RS01710 (AAHT64_01710) - 337987..338155 (+) 169 Protein_341 urea ABC transporter substrate-binding protein -
  AAHT64_RS01715 (AAHT64_01715) - 338427..338591 (+) 165 WP_015649919.1 hypothetical protein -
  AAHT64_RS01720 (AAHT64_01720) ureA 338772..339089 (+) 318 WP_003227724.1 urease subunit gamma -
  AAHT64_RS01725 (AAHT64_01725) ureB 339086..339460 (+) 375 WP_003227726.1 urease subunit beta -
  AAHT64_RS01730 (AAHT64_01730) ureC 339457..341166 (+) 1710 WP_003243090.1 urease subunit alpha -
  AAHT64_RS01735 (AAHT64_01735) ywnA 341301..341702 (+) 402 WP_003227734.1 Rrf2 family transcriptional regulator -

Sequence

Protein


Download         Length: 377 a.a.        Molecular weight: 45037.17 Da        Isoelectric Point: 4.8005

>NTDB_id=895466 AAHT64_RS01695 WP_003227715.1 335745..336878(+) (rapC) [Bacillus subtilis subsp. subtilis strain R38]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=895466 AAHT64_RS01695 WP_003227715.1 335745..336878(+) (rapC) [Bacillus subtilis subsp. subtilis strain R38]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAACTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA

Domains

Predicted by InterProScan.

MalT-like TPR region (TPR_MalT)

(154-305)

response regulator aspartate phosphatase H, N terminal (RapH_N)

(6-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P70962

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

42.632

100

0.43
  rapF Bacillus subtilis subsp. subtilis str. 168

42.667

99.469

0.424