Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   R4699_RS00310 Genome accession   NZ_CP137105
Coordinates   57793..58614 (+) Length   273 a.a.
NCBI ID   WP_000601683.1    Uniprot ID   A0A0B7LII6
Organism   Streptococcus pneumoniae strain 16H2092     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 52793..63614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4699_RS00285 - 53145..53753 (+) 609 WP_044793583.1 hypothetical protein -
  R4699_RS00290 - 53746..54156 (+) 411 WP_044793582.1 hypothetical protein -
  R4699_RS00295 ply 54167..55582 (+) 1416 WP_001284353.1 cholesterol-dependent cytolysin pneumolysin -
  R4699_RS00300 - 56465..57181 (+) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  R4699_RS00305 - 57305..57776 (+) 472 Protein_60 MarR family winged helix-turn-helix transcriptional regulator -
  R4699_RS00310 rcrP 57793..58614 (+) 822 WP_000601683.1 ABC transporter permease Regulator
  R4699_RS00315 rcrQ 58669..59652 (+) 984 WP_224757774.1 ABC transporter ATP-binding protein/permease Regulator
  R4699_RS00320 - 59718..60080 (+) 363 WP_000078805.1 DUF2200 domain-containing protein -
  R4699_RS00325 - 60077..60580 (+) 504 WP_044789202.1 phosphatase PAP2 family protein -
  R4699_RS00330 - 60694..61140 (+) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  R4699_RS00335 - 61146..61820 (+) 675 WP_050105003.1 LiaF transmembrane domain-containing protein -
  R4699_RS00340 - 62085..62282 (+) 198 Protein_67 N-acetylmuramoyl-L-alanine amidase family protein -
  R4699_RS00345 - 62307..62438 (-) 132 WP_001811306.1 hypothetical protein -
  R4699_RS00350 - 62532..62831 (+) 300 WP_001818001.1 DUF4651 domain-containing protein -
  R4699_RS00355 - 62828..63145 (+) 318 WP_000615776.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 273 a.a.        Molecular weight: 30590.15 Da        Isoelectric Point: 5.9310

>NTDB_id=895454 R4699_RS00310 WP_000601683.1 57793..58614(+) (rcrP) [Streptococcus pneumoniae strain 16H2092]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIVFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=895454 R4699_RS00310 WP_000601683.1 57793..58614(+) (rcrP) [Streptococcus pneumoniae strain 16H2092]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTGT
TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7LII6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.193

100

0.597