Detailed information NTG0895346

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AAVB50_RS22360
• Genome accession: NZ_CP154923
• Coordinates: 4213747..4214868 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2233
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4208747..4219868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB50_RS22340 (AAVB50_22335)	znuC	4209254..4209949 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
AAVB50_RS22345 (AAVB50_22340)	znuA	4210004..4210963 (-)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
AAVB50_RS22350 (AAVB50_22345)	ycdG	4211151..4212839 (-)	1689	WP_345805653.1	alpha-glucosidase	-
AAVB50_RS22355 (AAVB50_22350)	ycdF	4212864..4213640 (-)	777	WP_003234739.1	SDR family oxidoreductase	-
AAVB50_RS22360 (AAVB50_22355)	rapF	4213747..4214868 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
AAVB50_RS22365 (AAVB50_22360)	cwlK	4214991..4215494 (+)	504	WP_069322342.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AAVB50_RS22370 (AAVB50_22365)	ycdC	4215502..4216863 (-)	1362	WP_345806528.1	YcdB/YcdC domain-containing protein	-
AAVB50_RS22375 (AAVB50_22370)	ycdB	4217050..4218471 (-)	1422	WP_345805654.1	YcdB/YcdC domain-containing protein	-
AAVB50_RS22380 (AAVB50_22375)	-	4218645..4218776 (+)	132	WP_003246334.1	hypothetical protein	-
AAVB50_RS22385 (AAVB50_22380)	ycdA	4218799..4219863 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=895346 AAVB50_RS22360 WP_015715201.1 4213747..4214868(-) (rapF) [Bacillus subtilis strain FUA2233]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=895346 AAVB50_RS22360 WP_015715201.1 4213747..4214868(-) (rapF) [Bacillus subtilis strain FUA2233]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405