Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAVB50_RS18235 Genome accession   NZ_CP154923
Coordinates   3413752..3414495 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain FUA2233     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3408752..3419495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB50_RS18215 (AAVB50_18210) - 3409131..3410522 (+) 1392 WP_345806475.1 hypothetical protein -
  AAVB50_RS18220 (AAVB50_18215) sndC 3410595..3411785 (+) 1191 WP_029317556.1 N-acetyl amino acid acetylase SndC -
  AAVB50_RS18225 (AAVB50_18220) ecsC 3411803..3412513 (-) 711 WP_345806476.1 EcsC family protein -
  AAVB50_RS18230 (AAVB50_18225) ecsB 3412533..3413759 (-) 1227 WP_017695369.1 ABC transporter permease EcsB -
  AAVB50_RS18235 (AAVB50_18230) pptA 3413752..3414495 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  AAVB50_RS18240 (AAVB50_18235) hinT 3414983..3415420 (+) 438 WP_003233231.1 HIT family protein -
  AAVB50_RS18245 (AAVB50_18240) serC 3415567..3416646 (+) 1080 WP_192858346.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  AAVB50_RS18250 (AAVB50_18245) trpP 3416770..3417288 (+) 519 WP_268553045.1 tryptophan transporter TrpP -
  AAVB50_RS18255 (AAVB50_18250) - 3417362..3417553 (-) 192 WP_003233238.1 hypothetical protein -
  AAVB50_RS18260 (AAVB50_18255) yhaH 3417683..3418039 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  AAVB50_RS18265 (AAVB50_18260) scoC 3418217..3418828 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  AAVB50_RS18270 (AAVB50_18265) yhaI 3418825..3419166 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=895323 AAVB50_RS18235 WP_003233230.1 3413752..3414495(-) (pptA) [Bacillus subtilis strain FUA2233]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=895323 AAVB50_RS18235 WP_003233230.1 3413752..3414495(-) (pptA) [Bacillus subtilis strain FUA2233]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACAATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAAGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCAATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547