Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAVB50_RS07285 Genome accession   NZ_CP154923
Coordinates   1349285..1349995 (+) Length   236 a.a.
NCBI ID   WP_015714539.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2233     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344285..1354995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB50_RS07265 (AAVB50_07260) ytfP 1344764..1346026 (-) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -
  AAVB50_RS07270 (AAVB50_07265) murJ 1346230..1347864 (+) 1635 WP_015251430.1 lipid II flippase MurJ -
  AAVB50_RS07275 (AAVB50_07270) rsuA 1347933..1348652 (+) 720 WP_029318266.1 pseudouridine synthase -
  AAVB50_RS07280 (AAVB50_07275) ytzE 1348774..1348995 (-) 222 WP_003152337.1 DeoR family transcriptional regulator -
  AAVB50_RS07285 (AAVB50_07280) pptA 1349285..1349995 (+) 711 WP_015714539.1 ABC transporter ATP-binding protein Regulator
  AAVB50_RS07290 (AAVB50_07285) ythQ 1349992..1351149 (+) 1158 WP_032722356.1 ABC transporter permease -
  AAVB50_RS07295 (AAVB50_07290) pbuO 1351188..1352486 (-) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  AAVB50_RS07300 (AAVB50_07295) pepV 1352583..1353974 (+) 1392 WP_014477689.1 dipeptidase PepV -
  AAVB50_RS07305 (AAVB50_07300) cysK 1354008..1354943 (-) 936 WP_003229237.1 cysteine synthase A -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26573.65 Da        Isoelectric Point: 5.5930

>NTDB_id=895238 AAVB50_RS07285 WP_015714539.1 1349285..1349995(+) (pptA) [Bacillus subtilis strain FUA2233]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=895238 AAVB50_RS07285 WP_015714539.1 1349285..1349995(+) (pptA) [Bacillus subtilis strain FUA2233]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGGGAATTTGCGCATCGGGCCCA
AAGCTTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432