Detailed information NTG0895134

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: R4703_RS08855
• Genome accession: NZ_CP137100
• Coordinates: 1631826..1632092 (+)
• Length: 88 a.a.
• NCBI ID: WP_001814186.1
• Uniprot ID: A0A654WS02
• Organism: Streptococcus pneumoniae strain LYP
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1631254..1631652	1631826..1632092	flank	174

Gene organization within MGE regions

Location: 1631254..1632092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4703_RS08850	-	1631254..1631742 (+)	489	Protein_1700	transposase	-
R4703_RS08855	HI0659	1631826..1632092 (+)	267	WP_001814186.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9641.11 Da
• Isoelectric Point: 4.2720

>NTDB_id=895134 R4703_RS08855 WP_001814186.1 1631826..1632092(+) (HI0659) [Streptococcus pneumoniae strain LYP]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=895134 R4703_RS08855 WP_001814186.1 1631826..1632092(+) (HI0659) [Streptococcus pneumoniae strain LYP]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

3D structure

• AlphaFold DB: A0A654WS02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	55.844	87.5	0.489