Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAYR29_RS18280 Genome accession   NZ_CP154918
Coordinates   3390124..3390918 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain FUA2231     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3385124..3395918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS18260 (AAYR29_18260) walR 3385366..3386073 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  AAYR29_RS18265 (AAYR29_18265) walK 3386081..3387916 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  AAYR29_RS18270 (AAYR29_18270) walH 3387906..3389273 (+) 1368 WP_217019889.1 WalRK two-component regulatory system regulator WalH -
  AAYR29_RS18275 (AAYR29_18275) walI 3389260..3390102 (+) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  AAYR29_RS18280 (AAYR29_18280) vicX 3390124..3390918 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  AAYR29_RS18285 (AAYR29_18285) htrA 3391000..3392202 (+) 1203 WP_021481077.1 serine protease HtrC Regulator
  AAYR29_RS18290 (AAYR29_18290) - 3392223..3392352 (+) 130 Protein_3506 hypothetical protein -
  AAYR29_RS18295 (AAYR29_18295) - 3392349..3392849 (-) 501 WP_015250813.1 PepSY domain-containing protein -
  AAYR29_RS18300 (AAYR29_18300) - 3393010..3393909 (-) 900 WP_332603843.1 PepSY domain-containing protein -
  AAYR29_RS18305 (AAYR29_18305) - 3394121..3394804 (+) 684 WP_038428106.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=895024 AAYR29_RS18280 WP_003226939.1 3390124..3390918(+) (vicX) [Bacillus subtilis strain FUA2231]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=895024 AAYR29_RS18280 WP_003226939.1 3390124..3390918(+) (vicX) [Bacillus subtilis strain FUA2231]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCCGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53