Detailed information NTG0895009

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AAYR29_RS15840
• Genome accession: NZ_CP154918
• Coordinates: 2967965..2969086 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2231
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2962965..2974086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS15820 (AAYR29_15820)	znuC	2963472..2964167 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
AAYR29_RS15825 (AAYR29_15825)	znuA	2964222..2965181 (-)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
AAYR29_RS15830 (AAYR29_15830)	ycdG	2965369..2967057 (-)	1689	WP_345805653.1	alpha-glucosidase	-
AAYR29_RS15835 (AAYR29_15835)	ycdF	2967082..2967858 (-)	777	WP_003234739.1	SDR family oxidoreductase	-
AAYR29_RS15840 (AAYR29_15840)	rapF	2967965..2969086 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
AAYR29_RS15845 (AAYR29_15845)	cwlK	2969209..2969712 (+)	504	WP_069322342.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AAYR29_RS15850 (AAYR29_15850)	ycdC	2969720..2971081 (-)	1362	WP_345806528.1	YcdB/YcdC domain-containing protein	-
AAYR29_RS15855 (AAYR29_15855)	ycdB	2971268..2972689 (-)	1422	WP_345805654.1	YcdB/YcdC domain-containing protein	-
AAYR29_RS15860 (AAYR29_15860)	-	2972863..2972994 (+)	132	WP_003246334.1	hypothetical protein	-
AAYR29_RS15865 (AAYR29_15865)	ycdA	2973017..2974081 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=895009 AAYR29_RS15840 WP_015715201.1 2967965..2969086(-) (rapF) [Bacillus subtilis strain FUA2231]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=895009 AAYR29_RS15840 WP_015715201.1 2967965..2969086(-) (rapF) [Bacillus subtilis strain FUA2231]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405