Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAYR29_RS11715 Genome accession   NZ_CP154918
Coordinates   2167968..2168711 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain FUA2231     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2162968..2173711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS11695 (AAYR29_11695) - 2163347..2164738 (+) 1392 WP_345806475.1 hypothetical protein -
  AAYR29_RS11700 (AAYR29_11700) sndC 2164811..2166001 (+) 1191 WP_029317556.1 N-acetyl amino acid acetylase SndC -
  AAYR29_RS11705 (AAYR29_11705) ecsC 2166019..2166729 (-) 711 WP_345806476.1 EcsC family protein -
  AAYR29_RS11710 (AAYR29_11710) ecsB 2166749..2167975 (-) 1227 WP_017695369.1 ABC transporter permease EcsB -
  AAYR29_RS11715 (AAYR29_11715) pptA 2167968..2168711 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  AAYR29_RS11720 (AAYR29_11720) hinT 2169199..2169636 (+) 438 WP_003233231.1 HIT family protein -
  AAYR29_RS11725 (AAYR29_11725) serC 2169783..2170862 (+) 1080 WP_192858346.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  AAYR29_RS11730 (AAYR29_11730) trpP 2170986..2171504 (+) 519 WP_268553045.1 tryptophan transporter TrpP -
  AAYR29_RS11735 (AAYR29_11735) - 2171578..2171769 (-) 192 WP_003233238.1 hypothetical protein -
  AAYR29_RS11740 (AAYR29_11740) yhaH 2171899..2172255 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  AAYR29_RS11745 (AAYR29_11745) scoC 2172433..2173044 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  AAYR29_RS11750 (AAYR29_11750) yhaI 2173041..2173382 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=894986 AAYR29_RS11715 WP_003233230.1 2167968..2168711(-) (pptA) [Bacillus subtilis strain FUA2231]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=894986 AAYR29_RS11715 WP_003233230.1 2167968..2168711(-) (pptA) [Bacillus subtilis strain FUA2231]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACAATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAAGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCAATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547